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Firedrake meeting 2023 12 06
Date and time 2023-11-29 1600 GMT (1600 UTC)
- Pick Chair and Minuter (DD to pick minuter)
- ALL: (ongoing) triage the open issues and confirm if they are indeed still open (and perhaps provide labels)
- JB: Move pyop3 and FInAT to firedrakeproject
- ALL: do things with SV's branches
- DH: Email to Andreas to have 2 (+ others!!!) loopy PRs merged TODO: FIND OUT WHICH PRS THESE ARE
- DH: Get Firedrake a docker open source account (link here)
- DH: Talk to GregVernon about PR#2116.
- DH: Revisit PR#2484.
- DH: Order more Firedrake stickers
- ALL/ANY: Drop libsupermesh (minutes)? JB: Waiting for https://github.com/Toblerity/rtree/pull/292
- DD: Investigate adjoint test fails in teardown (minutes)
Present: DD, DH, JB, KS, CC, CW, RK, PB, RNH, NB
Apologies:
Is #3282 an acceptable fix for #3247? In particular my fix will not catch this failure mode again, but I have no idea how to do that.
-> Yes, #3282 got merged.
More than half of the ~1250 warnings raised during CI are coming from 3 files (regression/test_zero_forms.py, regression/test_scaled_mass.py, test_interpolation_from_parent.py). The most common warning has to do with Constant(domain=mesh)
. Some of these Constants are vector valued, and cannot be replaced with Function(Rspace), as there's a silent bug that allows the creation of a vector-valued R-space but with Function.dat of the wrong shape, see #3046.
-> Can't differentiate wrt Constant
and vector-valued constants are currently not supported. Ongoing PR: #3046.
The way Constant
s are currently implemented is hacky and weird (e.g. see #3261 for how we differentiate them and implement ufl2unicode
). What is the way forward? Do they need adding to UFL (I think no, providing that UFL fix their type system)? Do we need to have vector-valued real Function
s (not Argument
s) (see above)?
-> A proper fix would require some serious thoughts and would need to happen at the UFL level, probably as part of the newfl rewrite. Not a priority at the moment.
Users are not happy!
- How do we better inform users that they need to update a separately built PETSc? -> Don't know
- How do we inform users of breaking changes being introduced by PRs?
See the issue 3276. This error is related to netgen
installation. We do not have this issue with the firedrakeproject/firedrake
image built in Ubuntu.
-> Make this go away by building on Docket container
Note that PRs put in this section should either be trivial or already have been reviewed. Discussion-worthy PRs should be separate agenda items.
- PB: fix demo #3281: Merged
- SM: #2776: Merged
1600 GMT (1600 UTC) 2023-12-13
Building locally
Tips
- Running Firedrake tests with different subpackage branches
- Modifying and Rebuilding PETSc and petsc4py
- Vectorisation
- Debugging C kernels with
lldb
on MacOS - Parallel MPI Debugging with
tmux-mpi
,pdb
andgdb
- Parallel MPI Debugging with VSCode and
debugpy
- Modifying generated code
- Kernel profiling with LIKWID
- breakpoint() builtin not working
- Debugging pytest with multiple processing
Developers Notes
- Upcoming meeting 2024-08-21
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