Discussions

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  scv.pl.scatter() error and gene phase portraits

  AAA-3 asked Aug 24, 2021 in Q&A · Unanswered

  

  

  

  

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  What exactly mean about the Walnut type in scvelo

  honghh2018 asked Aug 25, 2021 in Q&A · Unanswered

  

  

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  Recommended practice for scvelo fit evaluation

  mxposed started Aug 23, 2021 in General

  

  

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  Problem with merge function

  ljouneau asked Aug 24, 2021 in Q&A · Unanswered

  

  

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  Using custom colours for embedding

  AAA-3 asked Aug 23, 2021 in Q&A · Answered

  

  

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  Using precomputed tSNE coordinates

  AAA-3 asked Aug 18, 2021 in Q&A · Answered

  

  

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  trajectories change a lot modifying the number of n_top_genes

  auroramaurizio asked Aug 12, 2021 in Q&A · Unanswered

  

  

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  Counting the number of switches

  mmmuhan asked Jul 30, 2021 in Q&A · Answered

  

  

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  scv.pl.velocity subset on groups not working

  SyrupBadger asked Jul 30, 2021 in Q&A · Unanswered

  

  

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  How to use splice/unsplice proportion and phase plot to judge the applicability of scVelo to a dataset

  gundalav asked Jul 30, 2021 in Q&A · Unanswered

  

  

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  How to show scVelo plot in RStudio (reticulate)

  gundalav asked Jul 30, 2021 in Q&A · Unanswered

  

  

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  Comparing scVelo and CytoTrace results

  gundalav asked Jul 29, 2021 in Q&A · Unanswered

  

  

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  Adaptation of velocyto and scVelo

  Xin-jxy asked Jul 28, 2021 in Q&A · Unanswered

  

  

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  compare with monocle?

  wyvern114 asked Jul 27, 2021 in Q&A · Unanswered

  

  

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  Error of scv.tl.recover_dynamics() for sbutype cluster

  bug Something isn't working third party Issue related / due to a third party

  Xin-jxy asked Jul 21, 2021 in Q&A · Unanswered

  

  

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  The result showing paradox between arrow direct of velocyto and latent time direct

  enhancement

  honghh2018 asked Jul 21, 2021 in Q&A · Unanswered

  

  

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  Handling of CellID in scv.utils.merge

  ifanirene asked Jul 9, 2021 in Q&A · Answered

  

  

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  spliced and unspliced proportions are opposite of trajectory arrows

  jinyoung5484 asked Jul 13, 2021 in Q&A · Unanswered

  

  

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  how to add spliced/unspliced information to my h5ad object

  FADHLyemen asked Jun 7, 2021 in Q&A · Answered

  

  

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  barcodes associated to calculated clusters

  third party Issue related / due to a third party

  johaGL asked Jul 8, 2021 in Q&A · Answered

  

  

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  Question on scv.pl.velocity_graph Lines

  Jennifer-Foltz asked Jul 8, 2021 in Q&A · Unanswered

  

  

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  Interpretting mitochondrial reads

  14zac2 asked Jul 1, 2021 in Q&A · Unanswered

  

  

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  scvelo.pl.velocity scale of gene expression plot

  jinyoung5484 asked Jun 28, 2021 in Q&A · Unanswered

  

  

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  timescale of months

  FADHLyemen asked Jun 8, 2021 in Q&A · Unanswered

  

  

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  The difference between ”clusters_coarse“ and ”clusters“ from adata.obs

  sunshine1126 asked Jun 3, 2021 in Q&A · Unanswered

  

  

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