[TheiaCoV_Fasta_Batch] Substitute FASTA concatenating task to ensure proper sample_id propagation#274

Merged

sage-wright merged 7 commits intomainfrom im-theiacov-fasta-batch-fix

Dec 21, 2023

+65-46

Commits on Dec 19, 2023

Commits on Dec 20, 2023

fix output parsing to use the sample_name instead of the assembly_name
cimendes
committed
switch cat to awk 1 to account for missing newlines
sage-wright
committed

Commits on Dec 21, 2023