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I FORGOT THE M IN HTML SMH WHAT A DISASTER
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sage-wright committed Jan 2, 2025
1 parent a21a695 commit e2cfffb
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2 changes: 1 addition & 1 deletion tasks/taxon_id/contamination/task_krona.wdl
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Expand Up @@ -17,7 +17,7 @@ task krona {
python3 /KrakenTools/kreport2krona.py -r ~{kraken2_report} -o ~{samplename}_krona.txt

# Run krona with taxonomy on krakren report
ktImportText ~{samplename}_krona.txt -o ~{samplename}_krona.htl
ktImportText ~{samplename}_krona.txt -o ~{samplename}_krona.html
>>>
output {
String krona_version = read_string("VERSION")
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