Code

Add fine-tuned scGPT#17

Code

Merged

rcannood merged 14 commits intomainopenproblems-bio/task_batch_integration:mainfrom feature/no-ref/add-scGPT-finetunedopenproblems-bio/task_batch_integration:feature/no-ref/add-scGPT-finetunedCopy head branch name to clipboardJan 17, 2025

+765-10

Commits

Commits on Dec 3, 2024

• Move scgpt to scgpt_zeroshot

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  committed
  662a669

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• Create scgpt_finetuned component

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  committed
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Commits on Dec 4, 2024

• Fix name in scgpt_zeroshot

  lazappi

  committed
  a3fde5f

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• Add scgpt_finetuned pre-processing

  lazappi

  committed
  48bf44d

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Commits on Dec 10, 2024

• Add scgpt_finetuned fine-tuning and embedding

  lazappi

  committed
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• Add scgpt_finetuned to benchmark workflow

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  committed
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• Style scgpt_finetuned files

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  committed
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• Disable scgpt_finetuned tests

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• Remove docker run args from scgpt_finetuned

  lazappi

  committed
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• Merge remote-tracking branch 'origin/main' into feature/no-ref/add-scGPT-finetuned

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• Add model arguments to scgpt_finetuned

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  committed
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Commits on Jan 13, 2025

• Merge branch 'main' into feature/no-ref/add-scGPT-finetuned

  rcannood

  authored
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Commits on Jan 14, 2025

• Exclude scgpt_finetuned from full benchmark runs

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  committed
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Commits on Jan 15, 2025

• Merge remote-tracking branch 'origin/main' into feature/no-ref/add-scGPT-finetuned

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