Update to 4.2.8 & migrate internal bio-formats#20

Merged

emilroz merged 35 commits intoglencoesoftware:compat-4-2-aifrom DavidStirling:compart-4-2-8-ai-test

Oct 24, 2024

+75-70

Commits on Oct 21, 2024

Bump centrosome

bethac07
authored and
DavidStirling
committed
Bump core

gnodar01
authored and
DavidStirling
committed
Fix 3D display in MeasureImageOverlap

bethac07
authored and
DavidStirling
committed
fix measurment specification

bethac07
authored and
DavidStirling
committed
fix bad tests

bethac07
authored and
DavidStirling
committed
scale value

bethac07
authored and
DavidStirling
committed
remove tuple wrapping of labels

bethac07
authored and
DavidStirling
committed
Update runimagejmacro.py

bethac07
authored and
DavidStirling
committed
tell workers to pull the dictionary from disk

bethac07
authored and
DavidStirling
committed
check for case of mixed 0s and nans

bethac07
authored and
DavidStirling
committed
Update threshold.py

bethac07
authored and
DavidStirling
committed
Bump to 4.2.7

gnodar01
authored and
DavidStirling
committed
[CI fix] pin exact java version to match distribution

gnodar01
authored and
DavidStirling
committed
[CI fix] Adjust macos version and fix java specifier

gnodar01
authored and
DavidStirling
committed
[CI fix] place working dir for distribution in correct step

gnodar01
authored and
DavidStirling
committed
fix label assignment when different objects are neighbors

bethac07
authored and
DavidStirling
committed
Pin and bump versions

gnodar01
authored and
DavidStirling
committed
Move to non-broken pytest

gnodar01
authored and
DavidStirling
committed
Bump to 4.2.8

gnodar01
authored and
DavidStirling
committed
[build] Pin markupsafe for jinja

gnodar01
authored and
DavidStirling
committed
[CI] allow manual trigger

gnodar01
authored and
DavidStirling
committed
[CI] Switch to macos 13

gnodar01
authored and
DavidStirling
committed
Make pep 517 compat

gnodar01
authored and
DavidStirling
committed
Add tmate

gnodar01
authored and
DavidStirling
committed
Test modified java deps
DavidStirling
committed
Disabling PEP 517 no longer supported
DavidStirling
committed
Do bf after core
DavidStirling
committed
Override bf manually
DavidStirling
committed
Bump javabridge
DavidStirling
committed
Force prokaryote too
DavidStirling
committed
Force include core
DavidStirling
committed
Use tar for macos app
DavidStirling
committed
Use wheel for core
DavidStirling
committed
No editable installs
DavidStirling
committed

Commits on Oct 22, 2024

Disable auto update checker and fix version processor
DavidStirling
committed