Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Fix #23 #24

Closed
wants to merge 382 commits into from
Closed

Fix #23 #24

wants to merge 382 commits into from
This pull request is big! We’re only showing the most recent 250 commits.

Commits on Feb 13, 2024

  1. Configuration menu
    Copy the full SHA
    8da3398 View commit details
    Browse the repository at this point in the history

Commits on Feb 14, 2024

  1. Configuration menu
    Copy the full SHA
    d39f52e View commit details
    Browse the repository at this point in the history
  2. reducing dendency on session_state

    - workflow-dir is determined once from workspace session_state in WorkflowManager and passed on
    - put all UI functionality from WorkflowManager in StreamlitUI
    - each class is initialized only once and passed on if necessary
    axelwalter committed Feb 14, 2024
    Configuration menu
    Copy the full SHA
    9fd5bfc View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    af54b2f View commit details
    Browse the repository at this point in the history
  4. Configuration menu
    Copy the full SHA
    3643a7f View commit details
    Browse the repository at this point in the history
  5. Configuration menu
    Copy the full SHA
    7c939da View commit details
    Browse the repository at this point in the history

Commits on Feb 15, 2024

  1. remove streamlit from all workflow classes except for StreamlitUI, re…

    …work Files to FileManager
    axelwalter committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    b6030e8 View commit details
    Browse the repository at this point in the history
  2. pylint errors

    axelwalter committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    59a05d2 View commit details
    Browse the repository at this point in the history

Commits on Feb 19, 2024

  1. Merge pull request #41 from axelwalter/main

    Framework for TOPP tool workflows
    axelwalter authored Feb 19, 2024
    Configuration menu
    Copy the full SHA
    2490777 View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    5809ed5 View commit details
    Browse the repository at this point in the history

Commits on Mar 5, 2024

  1. Update StreamlitUI.py

    moved check if input files are in list to correct position
    axelwalter authored Mar 5, 2024
    Configuration menu
    Copy the full SHA
    914b702 View commit details
    Browse the repository at this point in the history

Commits on Mar 13, 2024

  1. Configuration menu
    Copy the full SHA
    8e6ae09 View commit details
    Browse the repository at this point in the history

Commits on Mar 19, 2024

  1. Configuration menu
    Copy the full SHA
    ca57cd5 View commit details
    Browse the repository at this point in the history
  2. update workflow

    t0mdavid-m committed Mar 19, 2024
    Configuration menu
    Copy the full SHA
    5ae364a View commit details
    Browse the repository at this point in the history
  3. update workflow

    t0mdavid-m committed Mar 19, 2024
    Configuration menu
    Copy the full SHA
    5828a5c View commit details
    Browse the repository at this point in the history
  4. add xerces

    t0mdavid-m committed Mar 19, 2024
    Configuration menu
    Copy the full SHA
    6f2a8a5 View commit details
    Browse the repository at this point in the history
  5. Configuration menu
    Copy the full SHA
    36f9ff3 View commit details
    Browse the repository at this point in the history
  6. add eigen

    t0mdavid-m committed Mar 19, 2024
    Configuration menu
    Copy the full SHA
    52713f3 View commit details
    Browse the repository at this point in the history
  7. eigen

    t0mdavid-m committed Mar 19, 2024
    Configuration menu
    Copy the full SHA
    4ce5bfa View commit details
    Browse the repository at this point in the history
  8. eigen

    t0mdavid-m committed Mar 19, 2024
    Configuration menu
    Copy the full SHA
    42b6380 View commit details
    Browse the repository at this point in the history

Commits on Mar 20, 2024

  1. contrib env change

    t0mdavid-m committed Mar 20, 2024
    Configuration menu
    Copy the full SHA
    06ff42b View commit details
    Browse the repository at this point in the history
  2. print debug

    t0mdavid-m committed Mar 20, 2024
    Configuration menu
    Copy the full SHA
    5746e4d View commit details
    Browse the repository at this point in the history
  3. minor fixes

    t0mdavid-m committed Mar 20, 2024
    Configuration menu
    Copy the full SHA
    0c6f991 View commit details
    Browse the repository at this point in the history
  4. Update build-windows-executable-app.yaml

    update the path
    Arslan-Siraj authored Mar 20, 2024
    Configuration menu
    Copy the full SHA
    00bcb67 View commit details
    Browse the repository at this point in the history
  5. Merge pull request #1 from Arslan-Siraj/patch-1

    Update build-windows-executable-app.yaml
    t0mdavid-m authored Mar 20, 2024
    Configuration menu
    Copy the full SHA
    e4cf43c View commit details
    Browse the repository at this point in the history
  6. enable streamlit app

    t0mdavid-m committed Mar 20, 2024
    Configuration menu
    Copy the full SHA
    0b5848a View commit details
    Browse the repository at this point in the history
  7. Merge branch 'TaggerViewerDeploy' of github.com:t0mdavid-m/FLASHViewe…

    …r into TaggerViewerDeploy
    t0mdavid-m committed Mar 20, 2024
    Configuration menu
    Copy the full SHA
    766e1fa View commit details
    Browse the repository at this point in the history

Commits on Mar 21, 2024

  1. Configuration menu
    Copy the full SHA
    d1e9e7c View commit details
    Browse the repository at this point in the history
  2. change node version

    t0mdavid-m committed Mar 21, 2024
    Configuration menu
    Copy the full SHA
    a1bec73 View commit details
    Browse the repository at this point in the history
  3. separate job for npm

    t0mdavid-m committed Mar 21, 2024
    Configuration menu
    Copy the full SHA
    1544168 View commit details
    Browse the repository at this point in the history
  4. add dependency to job

    t0mdavid-m committed Mar 21, 2024
    Configuration menu
    Copy the full SHA
    38e1bf8 View commit details
    Browse the repository at this point in the history
  5. fix typo

    t0mdavid-m committed Mar 21, 2024
    Configuration menu
    Copy the full SHA
    0f2034b View commit details
    Browse the repository at this point in the history
  6. Configuration menu
    Copy the full SHA
    dcd964b View commit details
    Browse the repository at this point in the history
  7. fix windows app download

    t0mdavid-m committed Mar 21, 2024
    Configuration menu
    Copy the full SHA
    9b4550b View commit details
    Browse the repository at this point in the history
  8. Configuration menu
    Copy the full SHA
    1002abf View commit details
    Browse the repository at this point in the history
  9. Configuration menu
    Copy the full SHA
    5874895 View commit details
    Browse the repository at this point in the history
  10. error handling

    t0mdavid-m committed Mar 21, 2024
    Configuration menu
    Copy the full SHA
    b47af84 View commit details
    Browse the repository at this point in the history
  11. modify CI triggers

    t0mdavid-m committed Mar 21, 2024
    Configuration menu
    Copy the full SHA
    2e7c5e4 View commit details
    Browse the repository at this point in the history
  12. Configuration menu
    Copy the full SHA
    baf17e6 View commit details
    Browse the repository at this point in the history

Commits on Mar 22, 2024

  1. fix windows pipeline

    t0mdavid-m committed Mar 22, 2024
    Configuration menu
    Copy the full SHA
    db9eaf1 View commit details
    Browse the repository at this point in the history
  2. add temp repo change

    t0mdavid-m committed Mar 22, 2024
    Configuration menu
    Copy the full SHA
    4c7da4d View commit details
    Browse the repository at this point in the history
  3. small adjustments

    t0mdavid-m committed Mar 22, 2024
    Configuration menu
    Copy the full SHA
    d571ff0 View commit details
    Browse the repository at this point in the history
  4. update version for node 20

    t0mdavid-m committed Mar 22, 2024
    Configuration menu
    Copy the full SHA
    08e03da View commit details
    Browse the repository at this point in the history
  5. Configuration menu
    Copy the full SHA
    231fd0e View commit details
    Browse the repository at this point in the history
  6. Configuration menu
    Copy the full SHA
    f03ae1b View commit details
    Browse the repository at this point in the history
  7. Update hook-streamlit.py

    t0mdavid-m authored Mar 22, 2024
    Configuration menu
    Copy the full SHA
    478868b View commit details
    Browse the repository at this point in the history
  8. Configuration menu
    Copy the full SHA
    a9ba455 View commit details
    Browse the repository at this point in the history
  9. Update hook-streamlit.py

    t0mdavid-m authored Mar 22, 2024
    Configuration menu
    Copy the full SHA
    8d55c11 View commit details
    Browse the repository at this point in the history
  10. Update hook-streamlit.py

    t0mdavid-m authored Mar 22, 2024
    Configuration menu
    Copy the full SHA
    ebd2091 View commit details
    Browse the repository at this point in the history
  11. Update hook-streamlit.py

    t0mdavid-m authored Mar 22, 2024
    Configuration menu
    Copy the full SHA
    66b8ff9 View commit details
    Browse the repository at this point in the history
  12. Update hook-streamlit.py

    t0mdavid-m authored Mar 22, 2024
    Configuration menu
    Copy the full SHA
    0fdd930 View commit details
    Browse the repository at this point in the history
  13. Update hook-streamlit.py

    t0mdavid-m authored Mar 22, 2024
    Configuration menu
    Copy the full SHA
    fe1259e View commit details
    Browse the repository at this point in the history
  14. Update hook-streamlit.py

    t0mdavid-m authored Mar 22, 2024
    Configuration menu
    Copy the full SHA
    6012ac7 View commit details
    Browse the repository at this point in the history
  15. Update run_app_temp.spec

    t0mdavid-m authored Mar 22, 2024
    Configuration menu
    Copy the full SHA
    b8f3986 View commit details
    Browse the repository at this point in the history
  16. Update run_app_temp.spec

    t0mdavid-m authored Mar 22, 2024
    Configuration menu
    Copy the full SHA
    554ad2c View commit details
    Browse the repository at this point in the history
  17. Merge pull request #18 from JeeH-K/deploy_version

    Update main branch with recent changes made by preparation for deployment
    JeeH-K authored Mar 22, 2024
    Configuration menu
    Copy the full SHA
    29116bd View commit details
    Browse the repository at this point in the history
  18. Configuration menu
    Copy the full SHA
    17107cd View commit details
    Browse the repository at this point in the history
  19. Configuration menu
    Copy the full SHA
    b67c0db View commit details
    Browse the repository at this point in the history
  20. Merge branch 'TaggerViewerDeploy' of github.com:t0mdavid-m/FLASHViewe…

    …r into TaggerViewerDeploy
    t0mdavid-m committed Mar 22, 2024
    Configuration menu
    Copy the full SHA
    b4e4721 View commit details
    Browse the repository at this point in the history
  21. update vue

    t0mdavid-m committed Mar 22, 2024
    Configuration menu
    Copy the full SHA
    8e34f2d View commit details
    Browse the repository at this point in the history
  22. reenable threads

    t0mdavid-m committed Mar 22, 2024
    Configuration menu
    Copy the full SHA
    5afcfeb View commit details
    Browse the repository at this point in the history
  23. fix filenames

    t0mdavid-m committed Mar 22, 2024
    Configuration menu
    Copy the full SHA
    79548a3 View commit details
    Browse the repository at this point in the history

Commits on Mar 23, 2024

  1. autopatch windows build

    t0mdavid-m committed Mar 23, 2024
    Configuration menu
    Copy the full SHA
    09eef4d View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    d7c7dbf View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    3bf9c4e View commit details
    Browse the repository at this point in the history
  4. fix tolerance

    t0mdavid-m committed Mar 23, 2024
    Configuration menu
    Copy the full SHA
    fb33f1c View commit details
    Browse the repository at this point in the history
  5. update workspace

    t0mdavid-m committed Mar 23, 2024
    Configuration menu
    Copy the full SHA
    2b99ed3 View commit details
    Browse the repository at this point in the history
  6. fix workspace selection

    t0mdavid-m committed Mar 23, 2024
    Configuration menu
    Copy the full SHA
    db89836 View commit details
    Browse the repository at this point in the history

Commits on Mar 24, 2024

  1. remove caching

    t0mdavid-m committed Mar 24, 2024
    Configuration menu
    Copy the full SHA
    3111c49 View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    6943829 View commit details
    Browse the repository at this point in the history

Commits on Mar 26, 2024

  1. Configuration menu
    Copy the full SHA
    12407ce View commit details
    Browse the repository at this point in the history
  2. fix fasta selection bug

    t0mdavid-m committed Mar 26, 2024
    Configuration menu
    Copy the full SHA
    2891b2b View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    99bba21 View commit details
    Browse the repository at this point in the history

Commits on Mar 27, 2024

  1. remove cache

    t0mdavid-m committed Mar 27, 2024
    Configuration menu
    Copy the full SHA
    55149f9 View commit details
    Browse the repository at this point in the history
  2. fix typo

    t0mdavid-m committed Mar 27, 2024
    Configuration menu
    Copy the full SHA
    2058bd4 View commit details
    Browse the repository at this point in the history

Commits on Apr 4, 2024

  1. update subpackage

    t0mdavid-m committed Apr 4, 2024
    Configuration menu
    Copy the full SHA
    7c74df0 View commit details
    Browse the repository at this point in the history
  2. add cachebust for vue

    t0mdavid-m committed Apr 4, 2024
    Configuration menu
    Copy the full SHA
    b4264b1 View commit details
    Browse the repository at this point in the history

Commits on Apr 11, 2024

  1. update gui

    t0mdavid-m committed Apr 11, 2024
    Configuration menu
    Copy the full SHA
    200bf3a View commit details
    Browse the repository at this point in the history
  2. add wizard

    t0mdavid-m committed Apr 11, 2024
    Configuration menu
    Copy the full SHA
    f33c894 View commit details
    Browse the repository at this point in the history

Commits on Apr 12, 2024

  1. remove wizard

    t0mdavid-m committed Apr 12, 2024
    Configuration menu
    Copy the full SHA
    ec01ebb View commit details
    Browse the repository at this point in the history
  2. cleanup filenames

    t0mdavid-m committed Apr 12, 2024
    Configuration menu
    Copy the full SHA
    07b7950 View commit details
    Browse the repository at this point in the history
  3. add FLASHDeconv as default

    t0mdavid-m committed Apr 12, 2024
    Configuration menu
    Copy the full SHA
    8b46be5 View commit details
    Browse the repository at this point in the history
  4. Configuration menu
    Copy the full SHA
    0119bb4 View commit details
    Browse the repository at this point in the history
  5. implement download section

    t0mdavid-m committed Apr 12, 2024
    Configuration menu
    Copy the full SHA
    c0937ec View commit details
    Browse the repository at this point in the history
  6. enable keep empty

    t0mdavid-m committed Apr 12, 2024
    Configuration menu
    Copy the full SHA
    a99b0e1 View commit details
    Browse the repository at this point in the history

Commits on Apr 13, 2024

  1. fix tagger selection

    t0mdavid-m committed Apr 13, 2024
    Configuration menu
    Copy the full SHA
    54bdd85 View commit details
    Browse the repository at this point in the history
  2. fix linebreak

    t0mdavid-m committed Apr 13, 2024
    Configuration menu
    Copy the full SHA
    40765db View commit details
    Browse the repository at this point in the history
  3. ignore all pycache

    t0mdavid-m committed Apr 13, 2024
    Configuration menu
    Copy the full SHA
    041a9c8 View commit details
    Browse the repository at this point in the history
  4. remove simple dockerfile

    t0mdavid-m committed Apr 13, 2024
    Configuration menu
    Copy the full SHA
    2ff43a2 View commit details
    Browse the repository at this point in the history
  5. ignore temp files

    t0mdavid-m committed Apr 13, 2024
    Configuration menu
    Copy the full SHA
    8792902 View commit details
    Browse the repository at this point in the history
  6. zip only on demand

    t0mdavid-m committed Apr 13, 2024
    Configuration menu
    Copy the full SHA
    cacedd5 View commit details
    Browse the repository at this point in the history

Commits on Apr 14, 2024

  1. fix windows workflow

    t0mdavid-m committed Apr 14, 2024
    Configuration menu
    Copy the full SHA
    927a35e View commit details
    Browse the repository at this point in the history

Commits on Apr 15, 2024

  1. shorten filenames

    t0mdavid-m committed Apr 15, 2024
    Configuration menu
    Copy the full SHA
    a9bfdcb View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    19ff341 View commit details
    Browse the repository at this point in the history

Commits on May 2, 2024

  1. strip config .toml

    t0mdavid-m committed May 2, 2024
    Configuration menu
    Copy the full SHA
    92af73d View commit details
    Browse the repository at this point in the history
  2. cleanup

    t0mdavid-m committed May 2, 2024
    Configuration menu
    Copy the full SHA
    15a623d View commit details
    Browse the repository at this point in the history

Commits on May 3, 2024

  1. prepare for merge

    t0mdavid-m committed May 3, 2024
    Configuration menu
    Copy the full SHA
    8b84a6a View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    b7edf16 View commit details
    Browse the repository at this point in the history

Commits on May 6, 2024

  1. fix missed conflicts

    t0mdavid-m committed May 6, 2024
    Configuration menu
    Copy the full SHA
    657b1dc View commit details
    Browse the repository at this point in the history
  2. fix port

    t0mdavid-m committed May 6, 2024
    Configuration menu
    Copy the full SHA
    608e447 View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    dd8aa11 View commit details
    Browse the repository at this point in the history
  4. update controlo

    t0mdavid-m committed May 6, 2024
    Configuration menu
    Copy the full SHA
    576af49 View commit details
    Browse the repository at this point in the history
  5. remove view.py

    t0mdavid-m committed May 6, 2024
    Configuration menu
    Copy the full SHA
    8537a86 View commit details
    Browse the repository at this point in the history
  6. separate file uploads

    t0mdavid-m committed May 6, 2024
    Configuration menu
    Copy the full SHA
    be5ddb5 View commit details
    Browse the repository at this point in the history
  7. do not exclude dist

    t0mdavid-m committed May 6, 2024
    Configuration menu
    Copy the full SHA
    e2b99ec View commit details
    Browse the repository at this point in the history
  8. Merge pull request #19 from t0mdavid-m/TaggerViewerMerge

    TaggerViewer Merge
    JeeH-K authored May 6, 2024
    Configuration menu
    Copy the full SHA
    e33fdd8 View commit details
    Browse the repository at this point in the history
  9. Configuration menu
    Copy the full SHA
    0ef23f1 View commit details
    Browse the repository at this point in the history

Commits on May 7, 2024

  1. Configuration menu
    Copy the full SHA
    5c86414 View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    d27d920 View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    e95cf45 View commit details
    Browse the repository at this point in the history
  4. Configuration menu
    Copy the full SHA
    ee9654a View commit details
    Browse the repository at this point in the history
  5. Configuration menu
    Copy the full SHA
    37d5ee8 View commit details
    Browse the repository at this point in the history

Commits on May 9, 2024

  1. Configuration menu
    Copy the full SHA
    2ffba21 View commit details
    Browse the repository at this point in the history
  2. fix numpy error

    t0mdavid-m committed May 9, 2024
    Configuration menu
    Copy the full SHA
    d38c6fd View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    bd557cd View commit details
    Browse the repository at this point in the history
  4. Configuration menu
    Copy the full SHA
    de01803 View commit details
    Browse the repository at this point in the history
  5. update vue js component

    t0mdavid-m committed May 9, 2024
    Configuration menu
    Copy the full SHA
    24c236b View commit details
    Browse the repository at this point in the history
  6. fix SequenceView backend

    t0mdavid-m committed May 9, 2024
    Configuration menu
    Copy the full SHA
    85b5bf6 View commit details
    Browse the repository at this point in the history
  7. reenable windows download

    t0mdavid-m committed May 9, 2024
    Configuration menu
    Copy the full SHA
    aef7465 View commit details
    Browse the repository at this point in the history

Commits on May 10, 2024

  1. Configuration menu
    Copy the full SHA
    a5fe292 View commit details
    Browse the repository at this point in the history
  2. fix parsing for viewer

    t0mdavid-m committed May 10, 2024
    Configuration menu
    Copy the full SHA
    ad9d343 View commit details
    Browse the repository at this point in the history
  3. update vue

    t0mdavid-m committed May 10, 2024
    Configuration menu
    Copy the full SHA
    df1b480 View commit details
    Browse the repository at this point in the history
  4. update vue

    t0mdavid-m committed May 10, 2024
    Configuration menu
    Copy the full SHA
    c89b267 View commit details
    Browse the repository at this point in the history

Commits on May 15, 2024

  1. relocating example files

    JeeH-K committed May 15, 2024
    Configuration menu
    Copy the full SHA
    44313c3 View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    2cdc72d View commit details
    Browse the repository at this point in the history
  3. add subsections

    t0mdavid-m committed May 15, 2024
    Configuration menu
    Copy the full SHA
    90b32e1 View commit details
    Browse the repository at this point in the history
  4. Configuration menu
    Copy the full SHA
    cf86f11 View commit details
    Browse the repository at this point in the history
  5. Configuration menu
    Copy the full SHA
    b8179ba View commit details
    Browse the repository at this point in the history
  6. fix trigger

    t0mdavid-m committed May 15, 2024
    Configuration menu
    Copy the full SHA
    3c370c7 View commit details
    Browse the repository at this point in the history
  7. Configuration menu
    Copy the full SHA
    25c274e View commit details
    Browse the repository at this point in the history
  8. fix syntax

    t0mdavid-m committed May 15, 2024
    Configuration menu
    Copy the full SHA
    739cbd2 View commit details
    Browse the repository at this point in the history
  9. Configuration menu
    Copy the full SHA
    0140400 View commit details
    Browse the repository at this point in the history
  10. point to FDdevelop

    t0mdavid-m committed May 15, 2024
    Configuration menu
    Copy the full SHA
    f8c4e82 View commit details
    Browse the repository at this point in the history
  11. Configuration menu
    Copy the full SHA
    8da0f65 View commit details
    Browse the repository at this point in the history
  12. use tar under windows?

    t0mdavid-m committed May 15, 2024
    Configuration menu
    Copy the full SHA
    fe6f85b View commit details
    Browse the repository at this point in the history
  13. fixing error in postprocessing

    JeeH-K committed May 15, 2024
    Configuration menu
    Copy the full SHA
    f353227 View commit details
    Browse the repository at this point in the history
  14. apply fix

    t0mdavid-m committed May 15, 2024
    Configuration menu
    Copy the full SHA
    03030f7 View commit details
    Browse the repository at this point in the history
  15. Configuration menu
    Copy the full SHA
    2565ad6 View commit details
    Browse the repository at this point in the history
  16. TEMPORARILY disable tests

    t0mdavid-m committed May 15, 2024
    Configuration menu
    Copy the full SHA
    a4afc27 View commit details
    Browse the repository at this point in the history
  17. fix parsing

    t0mdavid-m committed May 15, 2024
    Configuration menu
    Copy the full SHA
    84d69f0 View commit details
    Browse the repository at this point in the history

Commits on May 16, 2024

  1. fix js component path

    t0mdavid-m committed May 16, 2024
    Configuration menu
    Copy the full SHA
    f2b784b View commit details
    Browse the repository at this point in the history
  2. update docstring

    t0mdavid-m committed May 16, 2024
    Configuration menu
    Copy the full SHA
    7c9a46b View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    85fd499 View commit details
    Browse the repository at this point in the history
  4. adding reset option

    JeeH-K committed May 16, 2024
    Configuration menu
    Copy the full SHA
    21fb32b View commit details
    Browse the repository at this point in the history
  5. add decoy database

    t0mdavid-m committed May 16, 2024
    Configuration menu
    Copy the full SHA
    59e30ed View commit details
    Browse the repository at this point in the history
  6. Configuration menu
    Copy the full SHA
    5dd0b22 View commit details
    Browse the repository at this point in the history
  7. Configuration menu
    Copy the full SHA
    c4f4313 View commit details
    Browse the repository at this point in the history
  8. Configuration menu
    Copy the full SHA
    1b77f83 View commit details
    Browse the repository at this point in the history
  9. Configuration menu
    Copy the full SHA
    fda403b View commit details
    Browse the repository at this point in the history
  10. fix target

    t0mdavid-m committed May 16, 2024
    Configuration menu
    Copy the full SHA
    51007a9 View commit details
    Browse the repository at this point in the history
  11. only copy target binaries

    t0mdavid-m committed May 16, 2024
    Configuration menu
    Copy the full SHA
    ecdaf7c View commit details
    Browse the repository at this point in the history

Commits on May 17, 2024

  1. getting ready for deployment

    JeeH-K committed May 17, 2024
    Configuration menu
    Copy the full SHA
    eb74900 View commit details
    Browse the repository at this point in the history

Commits on May 18, 2024

  1. update vue js

    t0mdavid-m committed May 18, 2024
    Configuration menu
    Copy the full SHA
    24b16fb View commit details
    Browse the repository at this point in the history
  2. add documentation

    t0mdavid-m committed May 18, 2024
    Configuration menu
    Copy the full SHA
    56252fe View commit details
    Browse the repository at this point in the history

Commits on May 23, 2024

  1. add file upload section

    t0mdavid-m committed May 23, 2024
    Configuration menu
    Copy the full SHA
    f382ca9 View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    f0c66ce View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    e9d24c7 View commit details
    Browse the repository at this point in the history
  4. update vue component

    t0mdavid-m committed May 23, 2024
    Configuration menu
    Copy the full SHA
    3ba2f51 View commit details
    Browse the repository at this point in the history

Commits on May 24, 2024

  1. add FDR stuff

    AyeshaFerozAsad committed May 24, 2024
    Configuration menu
    Copy the full SHA
    48282e7 View commit details
    Browse the repository at this point in the history
  2. add fdr

    AyeshaFerozAsad committed May 24, 2024
    Configuration menu
    Copy the full SHA
    6b5cc3a View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    38b2a5d View commit details
    Browse the repository at this point in the history
  4. Merge pull request #2 from t0mdavid-m/FDRdevelop

    Fd rdevelop
    t0mdavid-m authored May 24, 2024
    Configuration menu
    Copy the full SHA
    157c282 View commit details
    Browse the repository at this point in the history
  5. fix bugs

    t0mdavid-m committed May 24, 2024
    Configuration menu
    Copy the full SHA
    140dfaa View commit details
    Browse the repository at this point in the history
  6. disable fdr

    t0mdavid-m committed May 24, 2024
    Configuration menu
    Copy the full SHA
    17fa5fd View commit details
    Browse the repository at this point in the history
  7. reenable fdr

    t0mdavid-m committed May 24, 2024
    Configuration menu
    Copy the full SHA
    0561605 View commit details
    Browse the repository at this point in the history
  8. exclude parameters

    t0mdavid-m committed May 24, 2024
    Configuration menu
    Copy the full SHA
    347291e View commit details
    Browse the repository at this point in the history
  9. Merge pull request #20 from JeeH-K/fix_merging_issues

    Fix merging issues
    JeeH-K authored May 24, 2024
    Configuration menu
    Copy the full SHA
    b71342c View commit details
    Browse the repository at this point in the history
  10. remove fdr complexity

    t0mdavid-m committed May 24, 2024
    Configuration menu
    Copy the full SHA
    d9a55fd View commit details
    Browse the repository at this point in the history
  11. Configuration menu
    Copy the full SHA
    d791e20 View commit details
    Browse the repository at this point in the history
  12. change submodule url

    t0mdavid-m committed May 24, 2024
    Configuration menu
    Copy the full SHA
    2fa2c00 View commit details
    Browse the repository at this point in the history
  13. add branch

    t0mdavid-m committed May 24, 2024
    Configuration menu
    Copy the full SHA
    37802fd View commit details
    Browse the repository at this point in the history

Commits on May 27, 2024

  1. Configuration menu
    Copy the full SHA
    be9652a View commit details
    Browse the repository at this point in the history
  2. Merge pull request #3 from t0mdavid-m/fix_flanking_mass_tolerance

    fix flanking mass tolerance display
    t0mdavid-m authored May 27, 2024
    Configuration menu
    Copy the full SHA
    73b6209 View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    b103a1a View commit details
    Browse the repository at this point in the history

Commits on May 28, 2024

  1. output seperation

    t0mdavid-m committed May 28, 2024
    Configuration menu
    Copy the full SHA
    f20608e View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    b1d1e8d View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    e808baa View commit details
    Browse the repository at this point in the history
  4. (minor) cleanup

    t0mdavid-m committed May 28, 2024
    Configuration menu
    Copy the full SHA
    8a84fbf View commit details
    Browse the repository at this point in the history
  5. Configuration menu
    Copy the full SHA
    47ce0d6 View commit details
    Browse the repository at this point in the history
  6. Configuration menu
    Copy the full SHA
    1b71f16 View commit details
    Browse the repository at this point in the history
  7. update js-component

    t0mdavid-m committed May 28, 2024
    Configuration menu
    Copy the full SHA
    5a9a5de View commit details
    Browse the repository at this point in the history
  8. Merge pull request #6 from t0mdavid-m/manual_dropdowns

    Remove initial value of drop down selectors
    t0mdavid-m authored May 28, 2024
    Configuration menu
    Copy the full SHA
    1a318b9 View commit details
    Browse the repository at this point in the history
  9. Merge pull request #5 from t0mdavid-m/separate_wdirs

    output separation
    t0mdavid-m authored May 28, 2024
    Configuration menu
    Copy the full SHA
    fb08e56 View commit details
    Browse the repository at this point in the history
  10. Merge pull request #4 from t0mdavid-m/allow_ambiguous_aa

    Add support for ambiguous AA in `SequenceView`
    t0mdavid-m authored May 28, 2024
    Configuration menu
    Copy the full SHA
    d095ec2 View commit details
    Browse the repository at this point in the history
  11. remove apply button

    t0mdavid-m committed May 28, 2024
    Configuration menu
    Copy the full SHA
    2f14ccc View commit details
    Browse the repository at this point in the history
  12. rename output files

    t0mdavid-m committed May 28, 2024
    Configuration menu
    Copy the full SHA
    a05c2ff View commit details
    Browse the repository at this point in the history

Commits on May 29, 2024

  1. Configuration menu
    Copy the full SHA
    e4ad376 View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    c656f46 View commit details
    Browse the repository at this point in the history
  3. FDR merging

    AyeshaFerozAsad committed May 29, 2024
    Configuration menu
    Copy the full SHA
    d689e54 View commit details
    Browse the repository at this point in the history
  4. fix file upload

    t0mdavid-m committed May 29, 2024
    Configuration menu
    Copy the full SHA
    eb1e832 View commit details
    Browse the repository at this point in the history
  5. Configuration menu
    Copy the full SHA
    7e8237e View commit details
    Browse the repository at this point in the history
  6. fix parsing

    t0mdavid-m committed May 29, 2024
    Configuration menu
    Copy the full SHA
    2486c8f View commit details
    Browse the repository at this point in the history
  7. Configuration menu
    Copy the full SHA
    d62bb02 View commit details
    Browse the repository at this point in the history
  8. safeguard

    t0mdavid-m committed May 29, 2024
    Configuration menu
    Copy the full SHA
    644f4a9 View commit details
    Browse the repository at this point in the history
  9. Merge pull request #7 from t0mdavid-m/FDRdevelop

    FDR merging
    t0mdavid-m authored May 29, 2024
    Configuration menu
    Copy the full SHA
    9a6cc4b View commit details
    Browse the repository at this point in the history
  10. Configuration menu
    Copy the full SHA
    3c5bed2 View commit details
    Browse the repository at this point in the history

Commits on May 30, 2024

  1. fix session_stat

    t0mdavid-m committed May 30, 2024
    Configuration menu
    Copy the full SHA
    c3f8eb3 View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    39260da View commit details
    Browse the repository at this point in the history
  3. update vue

    t0mdavid-m committed May 30, 2024
    Configuration menu
    Copy the full SHA
    2df805e View commit details
    Browse the repository at this point in the history
  4. Configuration menu
    Copy the full SHA
    d1cb871 View commit details
    Browse the repository at this point in the history
  5. Terminal by cz ions are excluded with 10ppm tol when generating inter…

    …nal ion in Sequence.py. Should be done in matching in the future.
    KyowonJeong committed May 30, 2024
    Configuration menu
    Copy the full SHA
    5f1982e View commit details
    Browse the repository at this point in the history

Commits on Jun 1, 2024

  1. fix windows

    t0mdavid-m committed Jun 1, 2024
    Configuration menu
    Copy the full SHA
    369ba06 View commit details
    Browse the repository at this point in the history

Commits on Jun 11, 2024

  1. remove unused page

    t0mdavid-m committed Jun 11, 2024
    Configuration menu
    Copy the full SHA
    650e72b View commit details
    Browse the repository at this point in the history

Commits on Jun 19, 2024

  1. make tool selection local

    t0mdavid-m committed Jun 19, 2024
    Configuration menu
    Copy the full SHA
    60bf9d4 View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    da44fc2 View commit details
    Browse the repository at this point in the history
  3. remove last show_pages()

    t0mdavid-m committed Jun 19, 2024
    Configuration menu
    Copy the full SHA
    8949f10 View commit details
    Browse the repository at this point in the history
  4. Merge pull request #9 from t0mdavid-m/fix_sidebar

    Fix sidebar
    t0mdavid-m authored Jun 19, 2024
    Configuration menu
    Copy the full SHA
    d34af3e View commit details
    Browse the repository at this point in the history

Commits on Jun 28, 2024

  1. include dependencies

    t0mdavid-m committed Jun 28, 2024
    Configuration menu
    Copy the full SHA
    ab2894e View commit details
    Browse the repository at this point in the history

Commits on Jun 29, 2024

  1. use v4 artifact download

    t0mdavid-m committed Jun 29, 2024
    Configuration menu
    Copy the full SHA
    668853c View commit details
    Browse the repository at this point in the history
  2. set package filename

    t0mdavid-m committed Jun 29, 2024
    Configuration menu
    Copy the full SHA
    9a5637b View commit details
    Browse the repository at this point in the history
  3. adjust path

    t0mdavid-m committed Jun 29, 2024
    Configuration menu
    Copy the full SHA
    d7f548d View commit details
    Browse the repository at this point in the history
  4. Configuration menu
    Copy the full SHA
    687826c View commit details
    Browse the repository at this point in the history
  5. Configuration menu
    Copy the full SHA
    7287621 View commit details
    Browse the repository at this point in the history
  6. fix syntax

    t0mdavid-m committed Jun 29, 2024
    Configuration menu
    Copy the full SHA
    d59fbab View commit details
    Browse the repository at this point in the history
  7. use powershell syntax

    t0mdavid-m committed Jun 29, 2024
    Configuration menu
    Copy the full SHA
    9c764d4 View commit details
    Browse the repository at this point in the history

Commits on Jun 30, 2024

  1. remove temporary trigger

    t0mdavid-m committed Jun 30, 2024
    Configuration menu
    Copy the full SHA
    3ea14cf View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    52c52a6 View commit details
    Browse the repository at this point in the history
  3. adjust arguments

    t0mdavid-m committed Jun 30, 2024
    Configuration menu
    Copy the full SHA
    40703ad View commit details
    Browse the repository at this point in the history
  4. only copy existing files..

    t0mdavid-m committed Jun 30, 2024
    Configuration menu
    Copy the full SHA
    aa5f86b View commit details
    Browse the repository at this point in the history
  5. Configuration menu
    Copy the full SHA
    d2d89c6 View commit details
    Browse the repository at this point in the history
  6. Configuration menu
    Copy the full SHA
    20138ce View commit details
    Browse the repository at this point in the history
  7. update vue.js component

    t0mdavid-m committed Jun 30, 2024
    Configuration menu
    Copy the full SHA
    9395d91 View commit details
    Browse the repository at this point in the history
  8. enable release

    t0mdavid-m committed Jun 30, 2024
    Configuration menu
    Copy the full SHA
    05a1e7f View commit details
    Browse the repository at this point in the history

Commits on Jul 1, 2024

  1. update emoji

    t0mdavid-m committed Jul 1, 2024
    Configuration menu
    Copy the full SHA
    e291d88 View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    4f1261b View commit details
    Browse the repository at this point in the history

Commits on Jul 2, 2024

  1. Configuration menu
    Copy the full SHA
    966a735 View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    f048f3e View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    6bc1716 View commit details
    Browse the repository at this point in the history
  4. Merge pull request #14 from t0mdavid-m/enable_table_side_scrolling

    Update vue.js component
    t0mdavid-m authored Jul 2, 2024
    Configuration menu
    Copy the full SHA
    f0adfe3 View commit details
    Browse the repository at this point in the history
  5. Configuration menu
    Copy the full SHA
    68a0b6b View commit details
    Browse the repository at this point in the history
  6. Configuration menu
    Copy the full SHA
    bf4ee50 View commit details
    Browse the repository at this point in the history
  7. Configuration menu
    Copy the full SHA
    c374cec View commit details
    Browse the repository at this point in the history
  8. fix parsing

    t0mdavid-m committed Jul 2, 2024
    Configuration menu
    Copy the full SHA
    a1f5dae View commit details
    Browse the repository at this point in the history
  9. fix tool display

    t0mdavid-m committed Jul 2, 2024
    Configuration menu
    Copy the full SHA
    a26169f View commit details
    Browse the repository at this point in the history
  10. Configuration menu
    Copy the full SHA
    f50f058 View commit details
    Browse the repository at this point in the history

Commits on Jul 3, 2024

  1. Configuration menu
    Copy the full SHA
    46d9877 View commit details
    Browse the repository at this point in the history
  2. update artifact version

    t0mdavid-m committed Jul 3, 2024
    Configuration menu
    Copy the full SHA
    1e864ca View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    35c49ba View commit details
    Browse the repository at this point in the history
  4. fix syntax

    t0mdavid-m committed Jul 3, 2024
    Configuration menu
    Copy the full SHA
    22122b3 View commit details
    Browse the repository at this point in the history

Commits on Jul 5, 2024

  1. Configuration menu
    Copy the full SHA
    88fa486 View commit details
    Browse the repository at this point in the history
  2. remove print statements

    t0mdavid-m committed Jul 5, 2024
    Configuration menu
    Copy the full SHA
    04c69a8 View commit details
    Browse the repository at this point in the history
  3. Configuration menu
    Copy the full SHA
    b526e6e View commit details
    Browse the repository at this point in the history
  4. show unassigned tags

    t0mdavid-m committed Jul 5, 2024
    Configuration menu
    Copy the full SHA
    114f497 View commit details
    Browse the repository at this point in the history
  5. Configuration menu
    Copy the full SHA
    36f0d85 View commit details
    Browse the repository at this point in the history
  6. fix indices

    t0mdavid-m committed Jul 5, 2024
    Configuration menu
    Copy the full SHA
    e51c8f8 View commit details
    Browse the repository at this point in the history
  7. Merge pull request #20 from t0mdavid-m/fix_tool_display

    Display correct tool in drop down
    t0mdavid-m authored Jul 5, 2024
    Configuration menu
    Copy the full SHA
    38c864b View commit details
    Browse the repository at this point in the history
  8. Merge pull request #19 from t0mdavid-m/fix_example_data

    Fix `FLASHQuant` File Management
    t0mdavid-m authored Jul 5, 2024
    Configuration menu
    Copy the full SHA
    a2293d2 View commit details
    Browse the repository at this point in the history
  9. Merge pull request #13 from t0mdavid-m/manage_threads_globally

    Manage threads globally
    t0mdavid-m authored Jul 5, 2024
    Configuration menu
    Copy the full SHA
    2ac498d View commit details
    Browse the repository at this point in the history
  10. Merge pull request #11 from t0mdavid-m/adjust_to_FLASHTnT

    Adjust to `FLASHTnT`
    t0mdavid-m authored Jul 5, 2024
    Configuration menu
    Copy the full SHA
    c21ffbe View commit details
    Browse the repository at this point in the history
  11. Merge pull request #10 from t0mdavid-m/build_windows_with_dependencies

    Build windows with dependencies
    t0mdavid-m authored Jul 5, 2024
    Configuration menu
    Copy the full SHA
    20d076f View commit details
    Browse the repository at this point in the history