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Fix #23 #24

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wants to merge 382 commits into from
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Fix #23 #24

wants to merge 382 commits into from

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t0mdavid-m
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Fixes #23

axelwalter and others added 30 commits February 13, 2024 16:48
@axelwalter
custom Python tools functionality
8da3398
@axelwalter
Files collect method replaces combine and flatten
d39f52e
@axelwalter
reducing dendency on session_state
9fd5bfc 
- workflow-dir is determined once from workspace session_state in WorkflowManager and passed on
- put all UI functionality from WorkflowManager in StreamlitUI
- each class is initialized only once and passed on if necessary
@axelwalter
improve commment on process ids
af54b2f
@axelwalter
make workflow-dir available as st.session_state for Files
3643a7f
@axelwalter
address review comments by JeeH-K
7c939da
@axelwalter
remove streamlit from all workflow classes except for StreamlitUI, re…
b6030e8 
…work Files to FileManager
@axelwalter
pylint errors
59a05d2
@axelwalter
Merge pull request #41 from axelwalter/main
2490777 
Framework for TOPP tool workflows
@axelwalter
fix upload file error in online mode
5809ed5
@axelwalter
Update StreamlitUI.py
914b702 
moved check if input files are in list to correct position
@t0mdavid-m
Merge remote-tracking branch 'template/main' into TaggerViewerDeploy
8e6ae09
@t0mdavid-m
update to new template version - cleanup neccessary
ca57cd5
@t0mdavid-m
update workflow
5ae364a
@t0mdavid-m
update workflow
5828a5c
@t0mdavid-m
add xerces
6f2a8a5
@t0mdavid-m
try different windows version
36f9ff3
@t0mdavid-m
add eigen
52713f3
@t0mdavid-m
eigen
4ce5bfa
@t0mdavid-m
eigen
42b6380
@t0mdavid-m
contrib env change
06ff42b
@t0mdavid-m
print debug
5746e4d
@t0mdavid-m
minor fixes
0c6f991
@Arslan-Siraj
Update build-windows-executable-app.yaml
00bcb67 
update the path
@t0mdavid-m
Merge pull request #1 from Arslan-Siraj/patch-1
e4cf43c 
Update build-windows-executable-app.yaml
@t0mdavid-m
enable streamlit app
0b5848a
@t0mdavid-m
Merge branch 'TaggerViewerDeploy' of github.com:t0mdavid-m/FLASHViewe…
766e1fa 
…r into TaggerViewerDeploy
@t0mdavid-m
update dockerfile to build js-component
d1e9e7c
@t0mdavid-m
change node version
a1bec73
@t0mdavid-m
separate job for npm
1544168
t0mdavid-m and others added 29 commits June 30, 2024 16:41
@t0mdavid-m
update vue.js component
9395d91
@t0mdavid-m
enable release
05a1e7f
@t0mdavid-m
update emoji
e291d88
@t0mdavid-m
change triggers to new deployment setup
4f1261b
@t0mdavid-m
adjust casting rules for parameter list
966a735
@t0mdavid-m
adjust output column change
f048f3e
@t0mdavid-m
update example output files
6bc1716
@t0mdavid-m
Merge pull request #14 from t0mdavid-m/enable_table_side_scrolling
f0adfe3 
Update vue.js component
@t0mdavid-m
update vue.js table display
68a0b6b
@t0mdavid-m
Merge branch 'develop' into adjust_to_FLASHTnT
bf4ee50
@t0mdavid-m
Merge branch 'develop' of github.com:t0mdavid-m/FLASHViewer into adju…
c374cec 
…st_to_FLASHTnT
@t0mdavid-m
fix parsing
a1f5dae
@t0mdavid-m
fix tool display
a26169f
@t0mdavid-m
add scaling with all tags for FLASHTnT
f50f058
@t0mdavid-m
adjust to changes in packaging
46d9877
@t0mdavid-m
update artifact version
1e864ca
@t0mdavid-m
zip files before uploading
35c49ba
@t0mdavid-m
fix syntax
22122b3
@t0mdavid-m
adjust to new output format
88fa486
@t0mdavid-m
remove print statements
04c69a8
@t0mdavid-m
adjust decoy database size
b526e6e
@t0mdavid-m
show unassigned tags
114f497
@t0mdavid-m
hide coverage if no tags are assigned
36f0d85
@t0mdavid-m
fix indices
e51c8f8
@t0mdavid-m
Merge pull request #20 from t0mdavid-m/fix_tool_display
38c864b 
Display correct tool in drop down
@t0mdavid-m
Merge pull request #19 from t0mdavid-m/fix_example_data
a2293d2 
Fix `FLASHQuant` File Management
@t0mdavid-m
Merge pull request #13 from t0mdavid-m/manage_threads_globally
2ac498d 
Manage threads globally
@t0mdavid-m
Merge pull request #11 from t0mdavid-m/adjust_to_FLASHTnT
c21ffbe 
Adjust to `FLASHTnT`
@t0mdavid-m
Merge pull request #10 from t0mdavid-m/build_windows_with_dependencies
20d076f 
Build windows with dependencies
@t0mdavid-m t0mdavid-m closed this Jul 5, 2024
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6 participants
@t0mdavid-m @axelwalter @Arslan-Siraj @JeeH-K @AyeshaFerozAsad @KyowonJeong