-
Notifications
You must be signed in to change notification settings - Fork 0
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Add SCT and dcm2niix installation instructions #2
Conversation
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
Looks good @valosekj ! Just minor comments
Merging to continue with other pipeline steps |
# Go to your home directory | ||
cd ~ | ||
# Download SCT v6.4 | ||
wget https://github.com/spinalcordtoolbox/spinalcordtoolbox/archive/refs/tags/6.4.zip |
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
Just a note: I use wget
instead of git clone
because Apple Developer Tools are needed for git
.
This PR adds instructions on how to install SCT and dcm2niix.
As discussed in #1, we opted to describe the installation process in README (instead of having an "installation script").
Link to the README: https://github.com/sct-pipeline/balgrist-sci/blob/jv/add_installation_instructions/README.md
Related: #1