v0.6.5

What's Changed

• Update README.md by @quantumjot in #397
• Correct passing of arguments optimize->optimize by @ianhi in #401
• Remove napari hub preview by @quantumjot in #403
• fixed centroid_type error for multichannel intensity_images by @nthndy in #398
• Fix linting error following #398 merge by @quantumjot in #404

New Contributors

• @ianhi made their first contribution in #401

Full Changelog: v0.6.4...v0.6.5

v0.6.4

What's Changed

• Testing C++11 compilation by @quantumjot in #309
• Switch out magicgui in favour of QtWidgets by @paddyroddy in #350
• Create tabbed widgets by @paddyroddy in #355
• Add support for 3.11 by @paddyroddy in #353
• Expose prob_not_assign in the plugin by @p-j-smith in #357
• Changes to update_segmentation by @nthndy in #354
• Show progress bar in plugin when running tracking by @p-j-smith in #358
• Remove excess spacing between the tab widget and the Run button by @p-j-smith in #359
• Add tooltips to all labels - not just to the widgets themselves by @p-j-smith in #360
• Add prune to manifest by @quantumjot in #364
• Ignore dummy objects when guessing ndim in utils.tracks_to_napari by @p-j-smith in #365
• Change hypotheses boxes to QListWidget to reduce space by @paddyroddy in #363
• Change widget heading names by @paddyroddy in #367
• Move stuff from motion to match original picture by @paddyroddy in #368
• Add title, logo, and docs link by @paddyroddy in #370
• Change to default black by @paddyroddy in #332
• Add default ranges for numerical issues by @paddyroddy in #376
• Change values from 0.001 to 0.1 / use config from btrack-examples by @paddyroddy in #374
• Upgrade cvxopt by @paddyroddy in #348
• Move fixtures into conftest.py by @paddyroddy in #331
• Don't set widget values in the widgets (as done from file) by @paddyroddy in #379
• Update registry with new commit hash by @paddyroddy in #382
• Add writer to plugin for exporting a Tracks layer to hdf by @p-j-smith in #369
• Improvements to hypothesis tab by @paddyroddy in #378
• Turn off codecov/patch by @paddyroddy in #390
• Some typing changes, general improvements, utilising generators etc. by @paddyroddy in #328
• Clarify some variable names and save by file stem as default by @paddyroddy in #391
• Add generation to docstrings by @quantumjot in #394
• Update napari hub DESCRIPTION.md by @quantumjot in #395

Full Changelog: v0.6.3...v0.6.4

v0.6.4rc3

What's Changed

• Testing C++11 compilation by @quantumjot in #309
• Switch out magicgui in favour of QtWidgets by @paddyroddy in #350
• Create tabbed widgets by @paddyroddy in #355
• Add support for 3.11 by @paddyroddy in #353
• Expose prob_not_assign in the plugin by @p-j-smith in #357
• Changes to update_segmentation by @nthndy in #354
• Show progress bar in plugin when running tracking by @p-j-smith in #358
• Remove excess spacing between the tab widget and the Run button by @p-j-smith in #359
• Add tooltips to all labels - not just to the widgets themselves by @p-j-smith in #360
• Add prune to manifest by @quantumjot in #364
• Ignore dummy objects when guessing ndim in utils.tracks_to_napari by @p-j-smith in #365
• Change hypotheses boxes to QListWidget to reduce space by @paddyroddy in #363
• Change widget heading names by @paddyroddy in #367
• Move stuff from motion to match original picture by @paddyroddy in #368
• Add title, logo, and docs link by @paddyroddy in #370
• Change to default black by @paddyroddy in #332
• Add default ranges for numerical issues by @paddyroddy in #376
• Change values from 0.001 to 0.1 / use config from btrack-examples by @paddyroddy in #374
• Upgrade cvxopt by @paddyroddy in #348
• Move fixtures into conftest.py by @paddyroddy in #331
• Don't set widget values in the widgets (as done from file) by @paddyroddy in #379
• Update registry with new commit hash by @paddyroddy in #382
• Add writer to plugin for exporting a Tracks layer to hdf by @p-j-smith in #369
• Improvements to hypothesis tab by @paddyroddy in #378
• Turn off codecov/patch by @paddyroddy in #390
• Some typing changes, general improvements, utilising generators etc. by @paddyroddy in #328
• Clarify some variable names and save by file stem as default by @paddyroddy in #391
• Add generation to docstrings by @quantumjot in #394

Full Changelog: v0.6.3...v0.6.4rc3

v0.6.4rc2

What's Changed

• Testing C++11 compilation by @quantumjot in #309
• Switch out magicgui in favour of QtWidgets by @paddyroddy in #350
• Create tabbed widgets by @paddyroddy in #355
• Add support for 3.11 by @paddyroddy in #353
• Expose prob_not_assign in the plugin by @p-j-smith in #357
• Changes to update_segmentation by @nthndy in #354
• Show progress bar in plugin when running tracking by @p-j-smith in #358
• Remove excess spacing between the tab widget and the Run button by @p-j-smith in #359
• Add tooltips to all labels - not just to the widgets themselves by @p-j-smith in #360
• Add prune to manifest by @quantumjot in #364
• Ignore dummy objects when guessing ndim in utils.tracks_to_napari by @p-j-smith in #365
• Change hypotheses boxes to QListWidget to reduce space by @paddyroddy in #363
• Change widget heading names by @paddyroddy in #367
• Move stuff from motion to match original picture by @paddyroddy in #368
• Add title, logo, and docs link by @paddyroddy in #370
• Change to default black by @paddyroddy in #332
• Add default ranges for numerical issues by @paddyroddy in #376
• Change values from 0.001 to 0.1 / use config from btrack-examples by @paddyroddy in #374
• Upgrade cvxopt by @paddyroddy in #348
• Move fixtures into conftest.py by @paddyroddy in #331
• Don't set widget values in the widgets (as done from file) by @paddyroddy in #379
• Update registry with new commit hash by @paddyroddy in #382
• Add writer to plugin for exporting a Tracks layer to hdf by @p-j-smith in #369
• Improvements to hypothesis tab by @paddyroddy in #378
• Turn off codecov/patch by @paddyroddy in #390
• Some typing changes, general improvements, utilising generators etc. by @paddyroddy in #328
• Clarify some variable names and save by file stem as default by @paddyroddy in #391

Full Changelog: v0.6.3...v0.6.4rc2

Tabbed widget preview

What's Changed

• Testing C++11 compilation by @quantumjot in #309
• Switch out magicgui in favour of QtWidgets by @paddyroddy in #350
• Create tabbed widgets by @paddyroddy in #355
• Add support for 3.11 by @paddyroddy in #353
• Expose prob_not_assign in the plugin by @p-j-smith in #357
• Changes to update_segmentation by @nthndy in #354
• Show progress bar in plugin when running tracking by @p-j-smith in #358
• Remove excess spacing between the tab widget and the Run button by @p-j-smith in #359
• Add tooltips to all labels - not just to the widgets themselves by @p-j-smith in #360
• Add prune to manifest by @quantumjot in #364
• Ignore dummy objects when guessing ndim in utils.tracks_to_napari by @p-j-smith in #365
• Change hypotheses boxes to QListWidget to reduce space by @paddyroddy in #363
• Change widget heading names by @paddyroddy in #367
• Move stuff from motion to match original picture by @paddyroddy in #368
• Add title, logo, and docs link by @paddyroddy in #370

Full Changelog: v0.6.3...v0.6.4rc

v0.6.3

What's Changed

• Pin pydantic version to <2 by @quantumjot in #345
• Add x back to functional evaluation while loading legacy files by @quantumjot in #341

Full Changelog: v0.6.2...v0.6.3

v0.6.2

What's Changed

• Minimise tox dependencies by @paddyroddy in #326
• Drop python 3.8 support & napari backends by @paddyroddy in #325
• Add updated tox configuration by @paddyroddy in #329
• Correct saving_tracks.rst by @zsdqui in #333
• Add legacy h5 support and tree inspection by @quantumjot in #334
• Fix formatting for developer guide by @quantumjot in #336

New Contributors

• @zsdqui made their first contribution in #333

Full Changelog: v0.6.1...v0.6.2

v0.6.1

What's Changed

• Refactor segmentation_to_objects by @quantumjot in #304
• Restore custom isort section sorting by @paddyroddy in #299
• Add debug info logger by @quantumjot in #302
• Add issue templates and SystemInformation class by @quantumjot in #307
• Fixing #310 and #311 by @nthndy in #312
• Fix mac silicon for napari by @paddyroddy in #306
• Add test for dummy IO by @quantumjot in #314
• Handle 4D data in the napari plugin by @p-j-smith in #317
• Fix plugin name in example script by @quantumjot in #320

Full Changelog: v0.6.0...v0.6.1

v0.6.0

Fixes bug introduced in v0.5.1.

What's Changed

• Fix H5 docstrings by @quantumjot in #298
• Remove update operator for compatibility, add tests by @quantumjot in #301
• Add segmentation_to_objects to API documentation by @quantumjot in #303
• Build wheels on earlier OS versions & verify binaries are included by @paddyroddy in #300

Full Changelog: v0.5.2...v0.6.0

v0.5.2

What's Changed

• Fix PyPI README: emojis & logo by @paddyroddy in #293
• Include binaries and upload to testpypi by @paddyroddy in #294

Full Changelog: v0.5.1...v0.5.2