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20 Open 8 Closed
20 Open 8 Closed
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Issues list

line search fails: “kernlab class prediction calculations failed; returning NAs”
#30 opened Aug 30, 2024 by savagyan00
query <- scPredict(query, reference) ● Matching reference with new dataset... ─ 2000 features present in reference loadings ─ 6 features shared between reference and new dataset ─ 0.3% of features in the reference are present in new dataset Error in GetAssayData(): ! assay must be one of "RNA" or "integrated", not "data".
#28 opened Mar 15, 2024 by seekning
3
scPredict error
#26 opened Oct 19, 2023 by reesyxan
8
Confusion ：The size of scPred object stored as rds is much larger than that displayed in Rstudio
#25 opened Apr 17, 2023 by maoqianqian0807
Warning message for Quick-TRANSfer
#24 opened Nov 8, 2022 by caitsimop
1
scPredict does not work
#23 opened Oct 7, 2022 by saeidamiri1
2
How can I add humancortex (from Azimuth) to reference?
#22 opened May 28, 2022 by yojetsharma
it seems a bug of trainModel.R
#21 opened May 19, 2022 by ATPs
errors during cell classification
#20 opened May 25, 2021 by carloelle
3
Update scPred for large datasets, Error: 'problem too large'
#19 opened Apr 20, 2021 by Elhl93
scPred probabilities greater than 1
#18 opened Feb 24, 2021 by Seandelao
1
Non-unique values when setting 'row.names'
#17 opened Feb 1, 2021 by a-solovyev12
3
Error in trainModel(): all the ROC metric values are missing
#16 opened Dec 10, 2020 by a-solovyev12
2
trouble of installing the package
#15 opened Nov 23, 2020 by xpcui
Older version not updated
#14 opened Nov 13, 2020 by mohit1997
Convergence Issue
#10 opened May 4, 2020 by mohit1997
Unable to reproduce results
#9 opened Apr 6, 2020 by mohit1997
Trouble running scPredict
#8 opened Mar 13, 2020 by suminwei2772
2
Large number of unassigned cells with threshold equal to 0.5
#7 opened Mar 3, 2020 by fbrundu
Cells Ids do not match cell IDs in metadata
#6 opened Jan 26, 2020 by rahulnutron
2
ProTip! Follow long discussions with comments:>50.