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update odgi/smoothxg #347

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Oct 26, 2023
Merged

update odgi/smoothxg #347

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2 changes: 1 addition & 1 deletion Dockerfile
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Original file line number Diff line number Diff line change
Expand Up @@ -72,7 +72,7 @@ RUN git clone --recursive https://github.com/ekg/seqwish \
RUN git clone --recursive https://github.com/pangenome/smoothxg \
&& cd smoothxg \
&& git pull \
&& git checkout 31d99f2005742f45032328a64f1914b01acf4bdf \
&& git checkout aaa0b283e13ca57c4e6e4e67a03451925f5342f1 \
&& git submodule update --init --recursive \
&& sed -i 's/-msse4.1/-march=sandybridge -Ofast/g' deps/spoa/CMakeLists.txt \
&& sed -i 's/-march=native/-march=sandybridge -Ofast/g' deps/spoa/CMakeLists.txt \
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