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Merge pull request #396 from pangenome/data_table
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fix workflow by updating data table
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AndreaGuarracino authored May 5, 2024
2 parents 832de90 + 516ef89 commit a8cb62d
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -175,8 +175,8 @@ RUN apt-key adv --keyserver hkp://keyserver.ubuntu.com:80 --recv-key B8F25A8A73E
&& apt-get clean \
&& apt-get purge \
&& rm -rf /var/lib/apt/lists/* \
&& wget https://cran.r-project.org/src/contrib/Archive/data.table/data.table_1.14.8.tar.gz \
&& R CMD INSTALL data.table_1.14.8.tar.gz
&& wget https://cran.r-project.org/src/contrib/Archive/data.table/data.table_1.15.2.tar.gz \
&& R CMD INSTALL data.table_1.15.2.tar.gz

RUN wget https://github.com/arq5x/bedtools2/releases/download/v2.31.0/bedtools.static \
&& mv bedtools.static /usr/local/bin/bedtools \
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