Merge pull request #423 from pangenome/update_stuff

update vcflib for fixed vcfwave
pangenome · Oct 31, 2024 · 212dbb1 · 212dbb1
2 parents 0e9c9e1 + 206ac19
commit 212dbb1
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/Dockerfile b/Dockerfile
@@ -113,10 +113,10 @@ RUN git clone https://github.com/pangenome/vcfbub \
 
 RUN git clone --recursive https://github.com/vcflib/vcflib.git \
     && cd vcflib \
-    && git checkout 2ad261860807e66dbd9bcb07fee1af47b9930d70 \
+    && git checkout 404b98a6a0601a8668fb039eae5196fa1ae12525 \
     && mkdir -p build \
     && cd build \
-    && cmake -DZIG=OFF -DCMAKE_BUILD_TYPE=Debug .. && cmake --build . -- -j $(nproc) \
+    && cmake -DZIG=OFF -DCMAKE_BUILD_TYPE=Debug -DWFA_GITMODULE=ON .. && cmake --build . -- -j $(nproc) \
     && mv vcfwave /usr/local/bin/vcfwave \
     && mv vcfuniq /usr/local/bin/vcfuniq \
     && cd ../ \