Coerce x to matrix for BiocNeighbors::findKNN() to address issue #4

pachterlab · Sep 8, 2024 · 6767954 · 6767954
1 parent 9473015
commit 6767954
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/R/concordex.R b/R/concordex.R
@@ -101,7 +101,7 @@ setMethod("calculateConcordex", "ANY",
               labels <- labels_make_friendly(labels, nm=dimnames(x)[[1]])
 
               req_args <- list(
-                  x=x,
+                  x=as.matrix(x),
                   labels=labels,
                   n_neighbors=n_neighbors,
                   compute_similarity=compute_similarity,