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    16 repositories

    • FlaGs2

      Public
      Updated FlaGs version. Replaces tkinter module for matplotlib for the graphical output.
      Python
      •
      GNU General Public License v3.0
      •1•4•2•0•Updated Jul 15, 2024Jul 15, 2024

    • tac_ms_af

      Public
      Alphafold predictions and scoring used in "Mechanism of phage sensing and abortion by toxin-antitoxin-chaperone systems"
      0•0•0•0•Updated Mar 25, 2024Mar 25, 2024

    • NetFlax_data

      Public
      Python
      •
      MIT License
      •1•1•0•0•Updated Jul 9, 2023Jul 9, 2023

    • FlaGs-Viz

      Public
      Python
      •0•0•0•0•Updated Jun 27, 2023Jun 27, 2023

    • NetFlax-Tax

      Public
      Python
      •0•0•0•0•Updated Jun 27, 2023Jun 27, 2023

    • uorf4u

      Public
      uorf4u is a bioinformatics tool for conserved upstream ORF annotation.
      bioinformaticsgenomicsuorfspythonpython3
      Shell
      •
      Other
      •1•13•0•0•Updated Jun 26, 2023Jun 26, 2023

    • msa4u

      Public
      A simple visualisation tool for Multiple Sequence Alignment.
      Shell
      •
      Do What The F*ck You Want To Public License
      •0•3•1•0•Updated Jun 26, 2023Jun 26, 2023

    • netflax

      Public
      0•0•0•0•Updated Mar 9, 2023Mar 9, 2023

    • 2023_Cfr

      Public
      Cfr alignments and phylogenies
      0•0•0•0•Updated Dec 30, 2022Dec 30, 2022

    • FlaGs

      Public
      Python
      •
      GNU General Public License v3.0
      •3•19•4•1•Updated Nov 8, 2022Nov 8, 2022

    • Panacea

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Nov 15, 2021Nov 15, 2021

    • eUIgene

      Public
      Finding intergenic nucleotide sequences in Fasta format between query gene and upstream gene
      Python
      •
      MIT License
      •0•0•0•0•Updated Apr 28, 2021Apr 28, 2021

    • 2020-NAR

      Public
      Scripts used for analysing 5P-Seq data
      Python
      •
      MIT License
      •0•0•0•0•Updated May 26, 2020May 26, 2020

    • Lab_protocols

      Public
      Wet lab protocols
      MIT License
      •0•0•0•0•Updated Jul 9, 2019Jul 9, 2019

    • 2019-NAR

      Public
      Pipeline for processing new1 riboseq data
      Python
      •
      MIT License
      •0•1•0•0•Updated Jun 10, 2019Jun 10, 2019

    • RiboSeqPy

      Public
      Collection of routines for processing Ribo-Seq data.
      Python
      •
      MIT License
      •0•3•0•0•Updated Nov 8, 2018Nov 8, 2018