fix descriptions

openproblems-bio · Jun 5, 2024 · 0c98650 · 0c98650
1 parent 3c5f23c
commit 0c98650
Show file tree

Hide file tree

Showing 5 changed files with 8 additions and 8 deletions.
diff --git a/src/api/comp_control_method.yaml b/src/api/comp_control_method.yaml
@@ -6,7 +6,7 @@ functionality:
       label: Control Method
       summary: A control method.
       description: |
-        A control method to predict perturbation effects.
+        A control method to serve as a quality control for the perturbation prediction benchmark.
   arguments:
     - name: --de_train_h5ad
       __merge__: file_de_train_h5ad.yaml

diff --git a/src/api/comp_method_notest.yaml b/src/api/comp_method_notest.yaml
@@ -4,9 +4,9 @@ functionality:
     type: method
     type_info:
       label: Method
-      summary: A regression method.
+      summary: A perturbation prediction method
       description: |
-        A regression method to predict the expression of one modality from another.
+        A method for predicting the perturbation response of small molecules on certain cell types.
   arguments:
     - name: --de_train_h5ad
       __merge__: file_de_train_h5ad.yaml

diff --git a/src/api/comp_metric.yaml b/src/api/comp_metric.yaml
@@ -4,9 +4,9 @@ functionality:
     type: metric
     type_info:
       label: Metric
-      summary: A metric to compare two predictions.
+      summary: A perturbation prediction metric
       description: |
-        A metric to compare two predictions.
+        A metric to compare a perturbation prediction to the ground truth.
   arguments:
     - name: --de_test_h5ad
       __merge__: file_de_test_h5ad.yaml

diff --git a/src/process_dataset/bootstrap/config.vsh.yaml b/src/process_dataset/bootstrap/config.vsh.yaml
@@ -5,9 +5,9 @@ functionality:
     type: process_dataset
     type_info:
       label: Bootstrap
-      summary: A component to generate bootstraps of a dataset.
+      summary: Bootstrap a dataset
       description: |
-        This component generates bootstraps of a dataset. It takes as input a parquet file and an h5ad file and generates bootstraps of the dataset. The bootstraps are saved as parquet and h5ad files.
+        This component bootstraps a dataset.
   argument_groups:
     - name: Inputs
       arguments:

diff --git a/src/process_dataset/run_limma/config.vsh.yaml b/src/process_dataset/run_limma/config.vsh.yaml
@@ -7,7 +7,7 @@ functionality:
       label: Limma
       summary: Run limma
       description: |
-        Run limma for the parturbation regression task.
+        Run limma for the perturbation regression task.
   arguments:
     - name: --input
       type: file