Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

fix the nested list bug that makes email not be delivered #3081

Open
wants to merge 1 commit into
base: dev
Choose a base branch
from
Open

fix the nested list bug that makes email not be delivered #3081

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
16 changes: 8 additions & 8 deletions nf_core/pipeline-template/subworkflows/local/utils_nfcore_pipeline_pipeline/main.nf
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -117,13 +117,13 @@ workflow PIPELINE_INITIALISATION {
workflow PIPELINE_COMPLETION {

take:
email // string: email address
email_on_fail // string: email address sent on pipeline failure
plaintext_email // boolean: Send plain-text email instead of HTML
outdir // path: Path to output directory where results will be published
monochrome_logs // boolean: Disable ANSI colour codes in log output
hook_url // string: hook URL for notifications
multiqc_report // string: Path to MultiQC report
email // string: email address
email_on_fail // string: email address sent on pipeline failure
plaintext_email // boolean: Send plain-text email instead of HTML
outdir // path: Path to output directory where results will be published
monochrome_logs // boolean: Disable ANSI colour codes in log output
hook_url // string: hook URL for notifications
multiqc_report // [string]: List of paths to MultiQC report (Note: only the first one will be used)

main:

Expand All @@ -134,7 +134,7 @@ workflow PIPELINE_COMPLETION {
//
workflow.onComplete {
if (email || email_on_fail) {
completionEmail(summary_params, email, email_on_fail, plaintext_email, outdir, monochrome_logs, multiqc_report.toList())
completionEmail(summary_params, email, email_on_fail, plaintext_email, outdir, monochrome_logs, multiqc_report)
}

completionSummary(monochrome_logs)
Expand Down
Loading