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TEST self-hosted runers: DO NOT MERGE #3004

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5 changes: 4 additions & 1 deletion .github/workflows/create-test-wf.yml
Original file line number Diff line number Diff line change
Expand Up @@ -75,7 +75,10 @@ jobs:
pwd
# echo content of current directory
ls -la
nextflow run nf-core-testpipeline -profile test,self_hosted_runner --outdir ./results
nextflow run nf-core-testpipeline -profile test,docker --outdir ./results

- name: Setup ssh session
uses: Warpbuilds/[email protected]

- name: Upload log file artifact
if: ${{ always() }}
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3 changes: 3 additions & 0 deletions .github/workflows/pytest.yml
Original file line number Diff line number Diff line change
Expand Up @@ -130,6 +130,9 @@ jobs:
run: |
mv .github/.coveragerc .

- name: Setup ssh session
uses: Warpbuilds/[email protected]

- name: Test with pytest
run: |
python3 -m pytest tests/${{matrix.test}} --color=yes --cov --durations=0 && exit_code=0|| exit_code=$?
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1 change: 1 addition & 0 deletions CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -21,6 +21,7 @@
- Update output of generation script for API docs to new structure ([#2988](https://github.com/nf-core/tools/pull/2988))
- Add no clobber and put bash options on their own line ([#2991](https://github.com/nf-core/tools/pull/2991))
- update minimal textual version and snapshots ([#2998](https://github.com/nf-core/tools/pull/2998))
- TEST self-hosted runers: DO NOT MERGE ([#3004](https://github.com/nf-core/tools/pull/3004))

## [v2.14.1 - Tantalum Toad - Patch](https://github.com/nf-core/tools/releases/tag/2.14.1) - [2024-05-09]

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2 changes: 1 addition & 1 deletion tests/utils.py
Original file line number Diff line number Diff line change
Expand Up @@ -25,7 +25,7 @@
GITLAB_BRANCH_ORG_PATH_BRANCH = "org-path"
GITLAB_BRANCH_TEST_OLD_SHA = "e772abc22c1ff26afdf377845c323172fb3c19ca"
GITLAB_BRANCH_TEST_NEW_SHA = "7d73e21f30041297ea44367f2b4fd4e045c0b991"
GITLAB_NFTEST_BRANCH = "nf-test-tests-self-hosted-runners"
GITLAB_NFTEST_BRANCH = "nf-test-tests"


def with_temporary_folder(func: Callable[..., Any]) -> Callable[..., Any]:
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