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Add nf-core configs create sub command (attempt 2) #3001

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Add nf-core configs create sub command (attempt 2) #3001

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e93b45a
Add basic skeleton with welcome screen
jfy133 May 25, 2024
266a163
Update changelgo
jfy133 May 25, 2024
71a1475
Fix linting failure
jfy133 May 25, 2024
a583018
Linting
jfy133 May 25, 2024
5e1dc52
Move common util functions/classes to common location
jfy133 May 26, 2024
03eaa52
Move textual CSS to common place
jfy133 May 26, 2024
b82b6fb
Add config type question
jfy133 May 26, 2024
5f6b2a4
Start adding basic details screen. Missing: validation. Not working: …
jfy133 May 26, 2024
e8233f5
Merge branch 'dev' into configbuilder2
jfy133 Jun 1, 2024
17971e6
Fix function calling due to move to generic location
jfy133 Jun 1, 2024
15f5be8
Copy over @mirpedrol 's writing functions
jfy133 Jun 1, 2024
4af6e99
Start making config writing function actually write nextflow configs
jfy133 Jun 2, 2024
2d7863a
Add URL saving, start adding validation: problem unless everything fi…
jfy133 Jun 8, 2024
edc2d8f
Merge branch 'dev' into configbuilder2
jfy133 Jun 30, 2024
e01c486
Merge branch 'dev' into configbuilder2
jfy133 Jun 30, 2024
f0cb5e9
Small debugging, now know the issue
jfy133 Jun 30, 2024
66227b7
Fixing writing of parameters to the input file when no input from user
jfy133 Jun 30, 2024
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4 changes: 4 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -17,6 +17,10 @@

- The `modules_nfcore` tag in the `main.nf.test` file of modules/subworkflows now displays the organization name in custom modules repositories ([#3005](https://github.com/nf-core/tools/pull/3005))

### Configs

- New command: `nf-core configs create wizard` for generating configs for nf-core pipelines ([#3001](https://github.com/nf-core/tools/pull/3001))

### General

- Update pre-commit hook astral-sh/ruff-pre-commit to v0.4.4 ([#2974](https://github.com/nf-core/tools/pull/2974))
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2 changes: 1 addition & 1 deletion MANIFEST.in
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Expand Up @@ -9,4 +9,4 @@ include nf_core/assets/logo/nf-core-repo-logo-base-lightbg.png
include nf_core/assets/logo/nf-core-repo-logo-base-darkbg.png
include nf_core/assets/logo/placeholder_logo.svg
include nf_core/assets/logo/MavenPro-Bold.ttf
include nf_core/pipelines/create/create.tcss
include nf_core/textual.tcss
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