Template: add option to exclude fastqc from pipeline template #7577
mirpedrolAnnotations
52 warnings
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Run test_test_utils.py with Python 3.12 on ubuntu-latest
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Run test_pipelines.py with Python 3.12 on ubuntu-latest
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Run test_cli.py with Python 3.12 on ubuntu-latest
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Run test_lint_utils.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_create.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_params_file.py with Python 3.12 on ubuntu-latest
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Run test_subworkflows.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_nfcore_yml.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_list.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_version_consistency.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_actions_ci.py with Python 3.12 on ubuntu-latest
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Run modules/test_bump_versions.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_merge_markers.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_files_unchanged.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_modules_json.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_actions_awstest.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_actions_awsfulltest.py with Python 3.12 on ubuntu-latest
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Run subworkflows/test_create.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_template_strings.py with Python 3.12 on ubuntu-latest
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Run modules/test_create.py with Python 3.12 on ubuntu-latest
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Run test_modules.py with Python 3.12 on ubuntu-latest
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Run modules/test_info.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_actions_schema_validation.py with Python 3.12 on ubuntu-latest
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Run subworkflows/test_list.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_multiqc_config.py with Python 3.12 on ubuntu-latest
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Run modules/test_remove.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_files_exist.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_create_logo.py with Python 3.12 on ubuntu-latest
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Run subworkflows/test_info.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_bump_version.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_lint.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_refgenie.py with Python 3.12 on ubuntu-latest
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Run modules/test_install.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_download.py with Python 3.12 on ubuntu-latest
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Run modules/test_list.py with Python 3.12 on ubuntu-latest
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Run subworkflows/test_remove.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_sync.py with Python 3.12 on ubuntu-latest
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Run test_utils.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_configs.py with Python 3.12 on ubuntu-latest
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Run modules/test_patch.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_create_app.py with Python 3.12 on ubuntu-latest
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Run subworkflows/test_install.py with Python 3.12 on ubuntu-latest
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Run pipelines/lint/test_nextflow_config.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_launch.py with Python 3.12 on ubuntu-latest
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Run pipelines/test_schema.py with Python 3.12 on ubuntu-latest
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Run subworkflows/test_lint.py with Python 3.12 on ubuntu-latest
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Run modules/test_modules_json.py with Python 3.12 on ubuntu-latest
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Run modules/test_update.py with Python 3.12 on ubuntu-latest
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Run modules/test_lint.py with Python 3.12 on ubuntu-latest
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Run subworkflows/test_update.py with Python 3.12 on ubuntu-latest
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Run test_components.py with Python 3.12 on ubuntu-latest
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coverage
Codecov: Failed to properly create commit: The process '/home/runner/work/_actions/codecov/codecov-action/5ecb98a3c6b747ed38dc09f787459979aebb39be/dist/codecov' failed with exit code 1
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Artifacts
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coverage_modules__test_bump_versions.py
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5.63 KB |
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coverage_modules__test_create.py
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5.57 KB |
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coverage_modules__test_info.py
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coverage_modules__test_install.py
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coverage_modules__test_lint.py
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6.86 KB |
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coverage_modules__test_list.py
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5.69 KB |
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coverage_modules__test_modules_json.py
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coverage_modules__test_patch.py
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coverage_modules__test_remove.py
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5.66 KB |
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coverage_modules__test_update.py
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5.89 KB |
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coverage_pipelines__lint__test_actions_awsfulltest.py
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6.37 KB |
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coverage_pipelines__lint__test_actions_awstest.py
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6.36 KB |
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coverage_pipelines__lint__test_actions_ci.py
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6.36 KB |
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coverage_pipelines__lint__test_actions_schema_validation.py
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6.37 KB |
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coverage_pipelines__lint__test_configs.py
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6.37 KB |
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coverage_pipelines__lint__test_files_exist.py
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6.38 KB |
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coverage_pipelines__lint__test_files_unchanged.py
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6.38 KB |
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coverage_pipelines__lint__test_merge_markers.py
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6.36 KB |
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coverage_pipelines__lint__test_modules_json.py
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6.37 KB |
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coverage_pipelines__lint__test_multiqc_config.py
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6.41 KB |
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coverage_pipelines__lint__test_nextflow_config.py
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6.41 KB |
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coverage_pipelines__lint__test_nfcore_yml.py
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6.37 KB |
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coverage_pipelines__lint__test_template_strings.py
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6.65 KB |
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coverage_pipelines__lint__test_version_consistency.py
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6.41 KB |
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coverage_pipelines__test_bump_version.py
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5.11 KB |
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coverage_pipelines__test_create.py
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5.06 KB |
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coverage_pipelines__test_create_app.py
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coverage_pipelines__test_create_logo.py
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coverage_pipelines__test_download.py
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coverage_pipelines__test_launch.py
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coverage_pipelines__test_lint.py
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coverage_pipelines__test_list.py
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4.97 KB |
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coverage_pipelines__test_params_file.py
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coverage_pipelines__test_refgenie.py
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5 KB |
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coverage_pipelines__test_schema.py
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coverage_pipelines__test_sync.py
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coverage_subworkflows__test_create.py
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6.42 KB |
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coverage_subworkflows__test_info.py
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6.52 KB |
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coverage_subworkflows__test_install.py
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6.48 KB |
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coverage_subworkflows__test_lint.py
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6.63 KB |
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coverage_subworkflows__test_list.py
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6.51 KB |
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coverage_subworkflows__test_remove.py
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6.52 KB |
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coverage_subworkflows__test_update.py
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6.61 KB |
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coverage_test_cli.py
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6.8 KB |
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coverage_test_components.py
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5.33 KB |
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coverage_test_lint_utils.py
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4.94 KB |
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coverage_test_modules.py
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5.56 KB |
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coverage_test_pipelines.py
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4.95 KB |
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coverage_test_subworkflows.py
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6.24 KB |
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coverage_test_test_utils.py
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4.95 KB |
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coverage_test_utils.py
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5.11 KB |
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