Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Display message when error 132 found #6675

Merged
merged 8 commits into from
Sep 20, 2024

Conversation

JoseEspinosa
Copy link
Member

As discussed on this issue kalign throws an error 132 when run in some CPUs types. Here, we catch it and show a message so that users are aware of the issue until is fixed.

PR checklist

  • This comment contains a description of changes (with reason).
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • nf-core modules test <MODULE> --profile docker
      • nf-core modules test <MODULE> --profile singularity
      • nf-core modules test <MODULE> --profile conda

Copy link
Member

@mahesh-panchal mahesh-panchal left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

🚀

@JoseEspinosa JoseEspinosa added this pull request to the merge queue Sep 20, 2024
Merged via the queue into nf-core:master with commit 49057d3 Sep 20, 2024
12 checks passed
@JoseEspinosa JoseEspinosa deleted the patch_kalign branch September 20, 2024 14:08
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants