add stubs gatk4 #15458
Triggered via pull request
September 20, 2024 09:03
famosab
Status
Failure
Total duration
8m 39s
Artifacts
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test.yml
on: pull_request
Matrix: nf-test
Matrix: nf-core-lint-modules
Matrix: nf-core-lint-modules
Matrix: pytest
confirm-pass
0s
Annotations
7 errors and 2 warnings
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pre-commit
Process completed with exit code 1.
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nf-core-lint-modules (gatk4/collectsvevidence)
Process completed with exit code 1.
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nf-core-lint-modules (gatk4/combinegvcfs)
Process completed with exit code 1.
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nf-core-lint-modules (gatk4/applybqsr)
Process completed with exit code 1.
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nf-test (modules/nf-core/gatk4/collectsvevidence, docker_self_hosted)
The runner has received a shutdown signal. This can happen when the runner service is stopped, or a manually started runner is canceled.
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nf-test (modules/nf-core/gatk4/collectsvevidence, docker_self_hosted)
The operation was canceled.
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confirm-pass
Process completed with exit code 1.
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pytest-changes
The following actions use a deprecated Node.js version and will be forced to run on node20: mirpedrol/paths-filter@main. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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pre-commit
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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