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Use augur merge to spike in USVI records #73

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j23414 opened this issue Dec 5, 2024 · 2 comments · Fixed by #75
Closed
2 tasks done

Use augur merge to spike in USVI records #73

j23414 opened this issue Dec 5, 2024 · 2 comments · Fixed by #75
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@victorlin
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enhancement New feature or request

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@j23414
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j23414 commented Dec 5, 2024 •
edited by victorlin
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Use the new augur merge feature to spike in USVI records into the phylogenetic build

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@j23414 j23414 added the enhancement New feature or request label Dec 5, 2024
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I'll take this as part of testing nextstrain/augur#1601

@victorlin victorlin self-assigned this Dec 6, 2024
This was referenced Dec 7, 2024
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Move URL generation to ingest workflow

I ended up not doing this and instead moved both url and accession column generation to a separate rule – it seemed like the easiest thing to do for now. Maybe a separate issue can be created to move url and accession column generation to ingest?

@j23414 j23414 mentioned this issue Dec 9, 2024
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Use augur merge nextstrain/zika
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