export: Add `--warning`, update schema #3193

Job	Run time
mypy	54s
check-docs	41s
pathogen-repo-ci (dengue)	3m 21s
pathogen-repo-ci-v0 (avian-flu)	1m 25s
pathogen-repo-ci (lassa)	7m 48s
pathogen-repo-ci-v0 (ebola)	1m 32s
pyright	12s
pathogen-repo-ci (measles)	2m 1s
pathogen-repo-ci-v0 (mumps)	1m 26s
test (python=3.9 biopython=1.80)	13m 46s
pathogen-repo-ci (mpox)	1m 47s
pathogen-repo-ci-v0 (ncov)	1m 36s
pathogen-repo-ci (oropouche)	1m 57s
pathogen-repo-ci-v0 (rsv)	9m 23s
test (python=3.9 biopython=1.82)	12m 59s
pathogen-repo-ci (rabies)	19m 17s
pathogen-repo-ci-v0 (seasonal-flu)	1m 47s
test (python=3.9 biopython=latest)	13m 44s
pathogen-repo-ci (seasonal-cov)	2m 3s
pathogen-repo-ci-v0 (tb)	1m 46s
test (python=3.10 biopython=1.80)	13m 44s
pathogen-repo-ci (wnv)	1m 39s
test (python=3.10 biopython=1.82)	13m 45s
pathogen-repo-ci (yellow-fever)	4m 59s
test (python=3.10 biopython=latest)	13m 43s
pathogen-repo-ci (zika)	1m 39s
test (python=3.11 biopython=1.80)	13m 27s
test (python=3.11 biopython=1.82)	13m 45s
test (python=3.11 biopython=latest)	13m 27s
test (python=3.12 biopython=1.82)	13m 45s
test (python=3.12 biopython=latest)	13m 44s
build-docs / build	2m 22s
codecov	0s
release	0s
rebuild-docker-image	0s
	3h 39m 24s

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