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Bug fix: Synonym sync tests (#705)
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- Update: Needed to change a file name
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joeflack4 authored Nov 22, 2024
1 parent 595da7f commit 4156066
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2 changes: 1 addition & 1 deletion tests/test_sync_synonym.py
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Expand Up @@ -53,7 +53,7 @@
INPUT_SOURCE_DB = IN_DIR / 'test_omim.db' # create via: sh run.sh make ../../tests/input/sync_synonym/test_omim.db
INPUT_MONDO_SYNONYMS = IN_DIR / 'mondo-synonyms-scope-type-xref.tsv' # create via: sh run.sh make ../../tests/input/sync_synonym/mondo-synonyms-scope-type-xref.tsv
INPUT_ONTO_SYNONYMS = IN_DIR / 'omim-synonyms-scope-type-xref.tsv' # create via: sh run.sh make ../../tests/input/sync_synonym/omim-synonyms-scope-type-xref.tsv
INPUT_EXCLUDED_SYNONYMS = CONFIG_DIR / 'mondo-excluded-values.yml'
INPUT_EXCLUDED_SYNONYMS = CONFIG_DIR / 'mondo-exclusion-configs.yml'
INPUT_MAPPINGS = IN_DIR / 'test_mondo.sssom.tsv'
INPUT_SOURCE_METADATA = META_DIR / 'omim.yml'
OUTPUT_ADDED = OUT_DIR / 'omim.synonyms.added.robot.tsv'
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