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@monarch-initiative

Monarch Initiative

Cross-species disease discovery and diagnosis

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  1. mondo mondo Public template

    Mondo Disease Ontology

    Jupyter Notebook 246 57

  2. koza koza Public

    Data transformation framework for LinkML data models

    Python 50 5

  3. MAxO MAxO Public

    Medical action ontology

    HTML 55 4

  4. helpdesk helpdesk Public

    The Monarch Initiative Helpdesk

    7

  5. monarch-ingest monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    Python 16 3

  6. monarch-app monarch-app Public

    Monarch Initiative website and API

    Python 23 6

Repositories

Showing 10 of 253 repositories
  • pairwise-phenopacket-compare Public
    monarch-initiative/pairwise-phenopacket-compare’s past year of commit activity
    Python 0 0 0 0 Updated Mar 31, 2025
  • mondo Public template

    Mondo Disease Ontology

    monarch-initiative/mondo’s past year of commit activity
    Jupyter Notebook 246 CC-BY-4.0 57 383 (2 issues need help) 49 Updated Mar 31, 2025
  • pheval.llm Public

    Analysis of LLMs for Clinical Observations

    monarch-initiative/pheval.llm’s past year of commit activity
    Python 7 BSD-3-Clause 0 9 1 Updated Mar 31, 2025
  • aurelian Public

    A motley crew of agents developed by the Monarch Initiative

    monarch-initiative/aurelian’s past year of commit activity
    Python 7 MIT 1 12 1 Updated Mar 30, 2025
  • medgen Public

    MedGen ingest.

    monarch-initiative/medgen’s past year of commit activity
    Python 1 0 9 0 Updated Mar 30, 2025
  • omim Public

    Data ingest pipeline for OMIM.

    monarch-initiative/omim’s past year of commit activity
    Jupyter Notebook 7 3 69 5 Updated Mar 30, 2025
  • monarch-phenologs Public
    monarch-initiative/monarch-phenologs’s past year of commit activity
    Python 3 BSD-3-Clause 0 15 0 Updated Mar 29, 2025
  • pheval-nextflow Public
    monarch-initiative/pheval-nextflow’s past year of commit activity
    Nextflow 0 0 0 0 Updated Mar 29, 2025
  • graph-agent-devops Public

    Working directory for reusable "simple" devops for the graph agent

    monarch-initiative/graph-agent-devops’s past year of commit activity
    HCL 0 BSD-3-Clause 0 5 0 Updated Mar 29, 2025
  • monarch-phenotype-profile-ingest Public

    human phenotype related ingests

    monarch-initiative/monarch-phenotype-profile-ingest’s past year of commit activity
    Python 0 MIT 0 0 1 Updated Mar 28, 2025
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