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Merge pull request #401 from monarch-initiative/docs-update-add-source
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Update: `add-new-source.md`
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joeflack4 authored Jan 25, 2024
2 parents 466b83c + a60abad commit 093c186
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12 changes: 10 additions & 2 deletions docs/developer/add-new-source.md
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Expand Up @@ -13,10 +13,18 @@ What this does: This will update several files, including the addition of compon
It is possible you may need to run this command twice. The first time will update the update process itself, and the
second time will run the update.


## 2. `metadata/*.yaml`
## 2. More config updates
### 2.1. `metadata/*.yaml`
Add a new metadata file to [src/ontology/metadata](https://github.com/monarch-initiative/mondo-ingest/blob/main/src/ontology/metadata). It is important we try and document as much about the source as we can.

### 2.2. `metadata/mondo.sssom.config.yml`
Prefixes need to be entered in the following places in the yml:
- `curie_map`
- `extended_prefix_map`

### 2.3. `config/prefixes.csv`
Add prefixes.

## 3. Docs
### 3.1. `mkdocs.yaml`
Update the Website Table of Contents in [mkdocs.yaml](https://github.com/monarch-initiative/mondo-ingest/blob/main/mkdocs.yaml)
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