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=== Do not change lines below ===
{
"chain": [],
"cmd": "containers/scripts/singularity_cmd run containers/images/bids/bids-fmriprep--20.2.5.sing -w ./workdir --participant-label 05 --anat-derivatives ./sourcedata/smriprep --fs-subjects-dir ./sourcedata/smriprep/sourcedata/freesurfer --bids-filter-file code/fmriprep_study-cneuromod.mario_sub-05_ses-001_bids_filters.json --output-layout bids --ignore slicetiming --use-syn-sdc --output-spaces MNI152NLin2009cAsym T1w:res-iso2mm --cifti-output 91k --notrack --write-graph --skip_bids_validation --omp-nthreads 8 --nprocs 12 --mem_mb 49152 --fs-license-file code/freesurfer.license --resource-monitor sourcedata/cneuromod.mario ./ participant",
"dsid": "c1c43979-a83d-42b7-9508-4fface179af8",
"exit": 0,
"extra_inputs": [
"containers/images/bids/bids-fmriprep--20.2.5.sing"
],
"inputs": [
"sourcedata/templateflow/tpl-MNI152NLin2009cAsym/",
"sourcedata/templateflow/tpl-OASIS30ANTs/",
"sourcedata/templateflow/tpl-fsLR/",
"sourcedata/templateflow/tpl-fsaverage/",
"sourcedata/templateflow/tpl-MNI152NLin6Asym/",
"sourcedata/cneuromod.mario/sub-05/ses-001/fmap/",
"sourcedata/cneuromod.mario/sub-05/ses-001/func/",
"sourcedata/smriprep/sub-05/anat/",
"sourcedata/smriprep/sourcedata/freesurfer/fsaverage/",
"sourcedata/smriprep/sourcedata/freesurfer/sub-05/"
],
"outputs": [
"."
],
"pwd": "."
}
^^^ Do not change lines above ^^^
=== Do not change lines below ===
{
"chain": [],
"cmd": "containers/scripts/singularity_cmd run containers/images/bids/bids-fmriprep--20.2.5.sing -w ./workdir --participant-label 05 --anat-derivatives ./sourcedata/smriprep --fs-subjects-dir ./sourcedata/smriprep/sourcedata/freesurfer --bids-filter-file code/fmriprep_study-cneuromod.mario_sub-05_ses-006_bids_filters.json --output-layout bids --ignore slicetiming --use-syn-sdc --output-spaces MNI152NLin2009cAsym T1w:res-iso2mm --cifti-output 91k --notrack --write-graph --skip_bids_validation --omp-nthreads 8 --nprocs 12 --mem_mb 49152 --fs-license-file code/freesurfer.license --resource-monitor sourcedata/cneuromod.mario ./ participant",
"dsid": "c1c43979-a83d-42b7-9508-4fface179af8",
"exit": 0,
"extra_inputs": [
"containers/images/bids/bids-fmriprep--20.2.5.sing"
],
"inputs": [
"sourcedata/templateflow/tpl-MNI152NLin2009cAsym/",
"sourcedata/templateflow/tpl-OASIS30ANTs/",
"sourcedata/templateflow/tpl-fsLR/",
"sourcedata/templateflow/tpl-fsaverage/",
"sourcedata/templateflow/tpl-MNI152NLin6Asym/",
"sourcedata/cneuromod.mario/sub-05/ses-006/fmap/",
"sourcedata/cneuromod.mario/sub-05/ses-006/func/",
"sourcedata/smriprep/sub-05/anat/",
"sourcedata/smriprep/sourcedata/freesurfer/fsaverage/",
"sourcedata/smriprep/sourcedata/freesurfer/sub-05/"
],
"outputs": [
"."
],
"pwd": "."
}
^^^ Do not change lines above ^^^
=== Do not change lines below ===
{
"chain": [],
"cmd": "containers/scripts/singularity_cmd run containers/images/bids/bids-fmriprep--20.2.5.sing -w ./workdir --participant-label 05 --anat-derivatives ./sourcedata/smriprep --fs-subjects-dir ./sourcedata/smriprep/sourcedata/freesurfer --bids-filter-file code/fmriprep_study-cneuromod.mario_sub-05_ses-004_bids_filters.json --output-layout bids --ignore slicetiming --use-syn-sdc --output-spaces MNI152NLin2009cAsym T1w:res-iso2mm --cifti-output 91k --notrack --write-graph --skip_bids_validation --omp-nthreads 8 --nprocs 12 --mem_mb 49152 --fs-license-file code/freesurfer.license --resource-monitor sourcedata/cneuromod.mario ./ participant",
"dsid": "c1c43979-a83d-42b7-9508-4fface179af8",
"exit": 0,
"extra_inputs": [
"containers/images/bids/bids-fmriprep--20.2.5.sing"
],
"inputs": [
"sourcedata/templateflow/tpl-MNI152NLin2009cAsym/",
"sourcedata/templateflow/tpl-OASIS30ANTs/",
"sourcedata/templateflow/tpl-fsLR/",
"sourcedata/templateflow/tpl-fsaverage/",
"sourcedata/templateflow/tpl-MNI152NLin6Asym/",
"sourcedata/cneuromod.mario/sub-05/ses-004/fmap/",
"sourcedata/cneuromod.mario/sub-05/ses-004/func/",
"sourcedata/smriprep/sub-05/anat/",
"sourcedata/smriprep/sourcedata/freesurfer/fsaverage/",
"sourcedata/smriprep/sourcedata/freesurfer/sub-05/"
],
"outputs": [
"."
],
"pwd": "."
}
^^^ Do not change lines above ^^^
=== Do not change lines below ===
{
"chain": [],
"cmd": "containers/scripts/singularity_cmd run containers/images/bids/bids-fmriprep--20.2.5.sing -w ./workdir --participant-label 05 --anat-derivatives ./sourcedata/smriprep --fs-subjects-dir ./sourcedata/smriprep/sourcedata/freesurfer --bids-filter-file code/fmriprep_study-cneuromod.mario_sub-05_ses-017_bids_filters.json --output-layout bids --ignore slicetiming --use-syn-sdc --output-spaces MNI152NLin2009cAsym T1w:res-iso2mm --cifti-output 91k --notrack --write-graph --skip_bids_validation --omp-nthreads 8 --nprocs 12 --mem_mb 49152 --fs-license-file code/freesurfer.license --resource-monitor sourcedata/cneuromod.mario ./ participant",
"dsid": "c1c43979-a83d-42b7-9508-4fface179af8",
"exit": 0,
"extra_inputs": [
"containers/images/bids/bids-fmriprep--20.2.5.sing"
],
"inputs": [
"sourcedata/templateflow/tpl-MNI152NLin2009cAsym/",
"sourcedata/templateflow/tpl-OASIS30ANTs/",
"sourcedata/templateflow/tpl-fsLR/",
"sourcedata/templateflow/tpl-fsaverage/",
"sourcedata/templateflow/tpl-MNI152NLin6Asym/",
"sourcedata/cneuromod.mario/sub-05/ses-017/fmap/",
"sourcedata/cneuromod.mario/sub-05/ses-017/func/",
"sourcedata/smriprep/sub-05/anat/",
"sourcedata/smriprep/sourcedata/freesurfer/fsaverage/",
"sourcedata/smriprep/sourcedata/freesurfer/sub-05/"
],
"outputs": [
"."
],
"pwd": "."
}
^^^ Do not change lines above ^^^
=== Do not change lines below ===
{
"chain": [],
"cmd": "containers/scripts/singularity_cmd run containers/images/bids/bids-fmriprep--20.2.5.sing -w ./workdir --participant-label 05 --anat-derivatives ./sourcedata/smriprep --fs-subjects-dir ./sourcedata/smriprep/sourcedata/freesurfer --bids-filter-file code/fmriprep_study-cneuromod.mario_sub-05_ses-018_bids_filters.json --output-layout bids --ignore slicetiming --use-syn-sdc --output-spaces MNI152NLin2009cAsym T1w:res-iso2mm --cifti-output 91k --notrack --write-graph --skip_bids_validation --omp-nthreads 8 --nprocs 12 --mem_mb 49152 --fs-license-file code/freesurfer.license --resource-monitor sourcedata/cneuromod.mario ./ participant",
"dsid": "c1c43979-a83d-42b7-9508-4fface179af8",
"exit": 0,
"extra_inputs": [
"containers/images/bids/bids-fmriprep--20.2.5.sing"
],
"inputs": [
"sourcedata/templateflow/tpl-MNI152NLin2009cAsym/",
"sourcedata/templateflow/tpl-OASIS30ANTs/",
"sourcedata/templateflow/tpl-fsLR/",
"sourcedata/templateflow/tpl-fsaverage/",
"sourcedata/templateflow/tpl-MNI152NLin6Asym/",
"sourcedata/cneuromod.mario/sub-05/ses-018/fmap/",
"sourcedata/cneuromod.mario/sub-05/ses-018/func/",
"sourcedata/smriprep/sub-05/anat/",
"sourcedata/smriprep/sourcedata/freesurfer/fsaverage/",
"sourcedata/smriprep/sourcedata/freesurfer/sub-05/"
],
"outputs": [
"."
],
"pwd": "."
}
^^^ Do not change lines above ^^^
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