Releases: cancervariants/gene-normalization
Releases · cancervariants/gene-normalization
0.6.0
What's Changed
- chore!: rename optional dependency by @korikuzma in #388
- fix!:
ConceptMapping.coding.code
should be a CURIE by @korikuzma in #390
Full Changelog: 0.5.0...0.6.0
0.5.0
What's Changed
- docs: update VRS 2 branch link by @jsstevenson in #369
- build: pin setuptools for 3.12 by @jsstevenson in #373
- build!: require python >=3.11 by @jsstevenson in #375
- chore: add acceptance criteria to issue templates by @jsstevenson in #372
- style: update ruff configs by @jsstevenson in #371
- chore: update gitignore by @jsstevenson in #370
- cicd: update precommit configs by @jsstevenson in #374
- build: use latest wags-tails release by @jsstevenson in #376
- feat!: update models to vrs 2.0.0 community review ballot by @korikuzma in #378
- docs: clean up autodoc pages and refs by @jsstevenson in #382
- feat!: remove
normalized_id
and leverageMappableConcept.primaryCode
by @korikuzma in #381 - test: update test data by @korikuzma in #385
- feat!: use preferred formats for
MappableConcept.mappings
by @korikuzma in #386 - refactor: remove unnecessary
.lower()
call when creating concept mapping by @korikuzma in #387 - fix!:
system
should use source homepage by @korikuzma in #389
Full Changelog: 0.4.1...0.5.0
0.4.1
What's Changed
- cicd: update workflows/templates from template repo by @korikuzma in #364
- feat: update pre-commit version + add more hooks by @korikuzma in #363
- cicd: target stale workflow rev by @jsstevenson in #365
- refactor: resolve Pylance warnings by @korikuzma in #366
- build: pin ga4gh.vrs~=2.0.0a10 by @korikuzma in #367
Full Changelog: 0.4.0...0.4.1
0.4.0
What's Changed
- build: require >= Python 3.10 by @korikuzma in #353
- build!: update ga4gh.vrs version + reduce vrs id checks in tests by @korikuzma in #354
- style: update ruff to 0.5.0 by @korikuzma in #355
- feat!: use setuptools-scm, capture version at package root by @korikuzma in #359
- chore: remove unused configs in pyproject.toml by @korikuzma in #358
- style: ruff format by @korikuzma in #357
- refactor: remove unused code by @korikuzma in #360
- refactor: use DataLicenseAttributes Pydantic model by @korikuzma in #361
- cicd: update actions + docs workflow from template by @korikuzma in #356
- fix(docs): rearrange structure + update ci workflow deps by @korikuzma in #362
Full Changelog: 0.3.2...0.4.0
0.3.2
0.3.1
What's Changed
- docs: fix link in openapi description by @jsstevenson in #345
- docs: fix stable version badge by @jsstevenson in #344
- fix: correctly configure logging by @jsstevenson in #349
Full Changelog: 0.3.0-dev2...0.3.1
0.1.30
What's Changed
- fix: return all locations in response (#126, #152) by @korikuzma in #153
Full Changelog: 0.1.29...0.1.30
0.1.29
What's Changed
- fix: move SOURCE_CLASS to cli (main branch) by @korikuzma in #149
- refactor!: remove elastic beanstalk work on main branch by @korikuzma in #151
Full Changelog: 0.1.28...0.1.29
0.1.28
What's Changed
- build: separate out etl (dev) dependencies on main by @korikuzma in #142
- refactor: how vrs chromosome/sequence locations are stored in dynamodb by @korikuzma in #144
Full Changelog: 0.1.27...0.1.28