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Request to understand the LMM models in alpha, beta diversity and Differencial abundance.
question
Further information is requested
#67
opened Oct 28, 2024 by
OrsonMM
mStat_generate_report_long() : Error in update_data_obj_count()
Bug Fixed
This bug has been addressed and resolved in the latest update.
bug
Something isn't working
#62
opened Aug 1, 2024 by
wode0000ai
Maintain Sample Order Consistency in mStat_aggregate_by_taxonomy() Output
enhancement
New feature or request
good first issue
Good for newcomers
#60
opened Jul 3, 2024 by
qqwxp
Weights for Samples of LinDA Modelling
enhancement
New feature or request
good first issue
Good for newcomers
#59
opened Jun 30, 2024 by
DarioS
error while running the generate_beta_trend_test_long function
bug
Something isn't working
Not a Bug - Solution Provided
This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#58
opened Jun 26, 2024 by
yejunbin
Create Graphs/Analyses without Performing Rarefaction
enhancement
New feature or request
#57
opened May 30, 2024 by
pkirti33
Wiki Example Code Seems Outdated
documentation
Improvements or additions to documentation
#55
opened May 30, 2024 by
DarioS
LinDA Unusual p-value Distribution
good first issue
Good for newcomers
#54
opened May 29, 2024 by
DarioS
MicrobiomeStat::generate_beta_test_single
represents errors
Not a Bug - Solution Provided
#52
opened May 17, 2024 by
HuaZou
Error in midpoint(data.obj$tree) : could not find function "midpoint"
Not a Bug - Solution Provided
This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#49
opened May 8, 2024 by
nutrimol
mStat_generate_report_single(): error in linda() call
Bug Fixed
This bug has been addressed and resolved in the latest update.
bug
Something isn't working
#48
opened May 6, 2024 by
SciLiciumTheo
qiime2 style metadata import error
Not a Bug - Solution Provided
This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#46
opened Apr 27, 2024 by
magicprotoss
Datatype of feature.tab not matrix after normalization
Bug Fixed
This bug has been addressed and resolved in the latest update.
bug
Something isn't working
#45
opened Apr 23, 2024 by
pkirti33
Problems with MicrobiomeStat.rdb
good first issue
Good for newcomers
#40
opened Mar 20, 2024 by
kuzmpa
Error when running generate_beta_trend_test_long() function
Bug Fixed
This bug has been addressed and resolved in the latest update.
bug
Something isn't working
#37
opened Mar 7, 2024 by
QGaelle
Level of factor missing in output generate_alpha_trend_test_long() function.
Not a Bug - Solution Provided
This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#36
opened Mar 5, 2024 by
QGaelle
Format time.var in generate_alpha_trend_test_long() function
Not a Bug - Solution Provided
This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#35
opened Feb 29, 2024 by
QGaelle
Could not find function "mStat_convert_phyloseq_to_data_obj"
By Design
This behavior is intentional and is part of the package's design. It's not considered a bug or an is
Not a Bug - Solution Provided
This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#34
opened Feb 27, 2024 by
QGaelle
generate_taxa_test_pair() issue with time.var = NULL in random effect
By Design
This behavior is intentional and is part of the package's design. It's not considered a bug or an is
Not a Bug - Solution Provided
This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#33
opened Feb 18, 2024 by
16svale
handling the false discovery rate ("fdr")
By Design
This behavior is intentional and is part of the package's design. It's not considered a bug or an is
#32
opened Feb 18, 2024 by
16svale
generate_alpha_trend_test_long giving fatal error, aborting R session
bug
Something isn't working
user-environment
Issues tagged with this label are suspected to arise from the user's specific environment or setup r
#30
opened Feb 8, 2024 by
aherms12
Error "contrasts can be applied only to factors with 2 or more levels" while using generate_alpha_change_test_pair()
bug
Something isn't working
Not a Bug - Solution Provided
This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#29
opened Feb 6, 2024 by
BiggusDickus666
Error: number of observations (=44) <= number of random effects (=44) for term (1 + time | subject)
By Design
This behavior is intentional and is part of the package's design. It's not considered a bug or an is
Not a Bug - Solution Provided
This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#26
opened Jan 22, 2024 by
AlexanderUm
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