docker GH action

bioexcel · Jun 5, 2024 · f26274f · f26274f
1 parent 0c4fd62
commit f26274f
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Showing 2 changed files with 13 additions and 2 deletions.
diff --git a/.github/workflows/docker.yaml b/.github/workflows/docker.yaml
@@ -9,6 +9,11 @@ jobs:
   sync:
     runs-on: ubuntu-latest
     steps:
+      - name: Checkout repo
+        uses: actions/checkout@v2
+        with:
+          repository: bioexcel/biobb_workflows
+          path: ./
       - name: Copy Dockerfile
         run: |
           cp common/docker/Dockerfile biobb_wf_amber_abc_setup/docker/Dockerfile
@@ -26,4 +31,10 @@ jobs:
           cp common/docker/Dockerfile biobb_wf_protein_md_analysis/docker/Dockerfile
           cp common/docker/Dockerfile biobb_wf_protein-complex_md_setup/docker/Dockerfile
           cp common/docker/Dockerfile biobb_wf_structure_checking/docker/Dockerfile
-          cp common/docker/Dockerfile biobb_wf_virtual-screening_fpocket/docker/Dockerfile
+          cp common/docker/Dockerfile biobb_wf_virtual-screening_fpocket/docker/Dockerfile
+
+      - name: Commit and push changes
+        run: |
+          git config --global user.name 'github-actions[bot]'
+          git config --global user.email 'github-actions[bot]@users.noreply.github.com'
+          git add */docker/Dockerfile && git commit -m "Updated Dockerfile" && git push
diff --git a/common/docker/Dockerfile b/common/docker/Dockerfile
@@ -69,4 +69,4 @@ CMD ["\
         source activate $REPOSITORY; \
         jupyter notebook --ip=0.0.0.0 --port=8888 --no-browser --allow-root --NotebookApp.token='' --NotebookApp.password=''; \
     fi \
-"]
+"]
-Original file line number
+Diff line change
@@ Expand Up / @@ -69,4 +69,4 @@ CMD ["\ @@
             source activate $REPOSITORY; \
             jupyter notebook --ip=0.0.0.0 --port=8888 --no-browser --allow-root --NotebookApp.token='' --NotebookApp.password=''; \
         fi \
-    "]
+    "]