[Typing](ALL): Update typing from python 3.8 style to python 3.9

bioexcel · Oct 17, 2024 · 48d4b7a · 48d4b7a
1 parent 92ff9e0
commit 48d4b7a
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diff --git a/biobb_godmd/docs/source/command_line.md b/biobb_godmd/docs/source/command_line.md
@@ -61,6 +61,7 @@ Config parameters for this building block:
 * **binary_path** (*string*): (discrete) Binary path..
 * **remove_tmp** (*boolean*): (True) Remove temporal files..
 * **restart** (*boolean*): (False) Do not execute if output files exist..
+* **sandbox_path** (*string*): (./) Parent path to the sandbox directory..
 ### YAML
 #### [Common config file](https://github.com/bioexcel/biobb_godmd/blob/master/biobb_godmd/test/data/config/config_godmd_run.yml)
 ```python
@@ -128,6 +129,7 @@ Config parameters for this building block:
 * **binary_path** (*string*): (water) Binary path..
 * **remove_tmp** (*boolean*): (True) Remove temporal files..
 * **restart** (*boolean*): (False) Do not execute if output files exist..
+* **sandbox_path** (*string*): (./) Parent path to the sandbox directory..
 ### YAML
 #### [Common config file](https://github.com/bioexcel/biobb_godmd/blob/master/biobb_godmd/test/data/config/config_godmd_prep.yml)
 ```python

diff --git a/biobb_godmd/json_schemas/godmd_prep.json b/biobb_godmd/json_schemas/godmd_prep.json
@@ -136,6 +136,12 @@
                     "default": false,
                     "wf_prop": true,
                     "description": "Do not execute if output files exist."
+                },
+                "sandbox_path": {
+                    "type": "string",
+                    "default": "./",
+                    "wf_prop": true,
+                    "description": "Parent path to the sandbox directory."
                 }
             }
         }

diff --git a/biobb_godmd/json_schemas/godmd_run.json b/biobb_godmd/json_schemas/godmd_run.json
@@ -269,6 +269,12 @@
                     "default": false,
                     "wf_prop": true,
                     "description": "Do not execute if output files exist."
+                },
+                "sandbox_path": {
+                    "type": "string",
+                    "default": "./",
+                    "wf_prop": true,
+                    "description": "Parent path to the sandbox directory."
                 }
             }
         }