Rewrite hmmer module to use processes instead of threads
#512
althonostest.yml
on: push
Matrix: Test (Linux, arm64)
Matrix: Test (Linux)
Matrix: Test (OSX)
Annotations
19 errors and 10 warnings
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Test (Linux) (3.8, v3.8, CPython)
Process completed with exit code 1.
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Test (Linux) (3.11, v3.11, CPython)
Process completed with exit code 1.
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Test (Linux) (3.9, v3.9, CPython)
The operation was canceled.
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Test (Linux) (pypy-3.9, v3.9, PyPy)
The operation was canceled.
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Test (Linux) (pypy-3.8, v3.8, PyPy)
The operation was canceled.
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Test (Linux) (3.10, v3.10, CPython)
The operation was canceled.
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Test (Linux) (3.7, v3.7, CPython)
The operation was canceled.
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Test (Linux) (pypy-3.7, v3.7, PyPy)
The operation was canceled.
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Test (OSX) (3.11, v3.11, CPython)
Process completed with exit code 1.
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Test (OSX) (3.7, v3.7, CPython)
The job was canceled because "_3_11_v3_11_CPython" failed.
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Test (OSX) (3.9, v3.9, CPython)
The job was canceled because "_3_11_v3_11_CPython" failed.
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Test (OSX) (pypy-3.7, v3.7, PyPy)
The job was canceled because "_3_11_v3_11_CPython" failed.
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Test (OSX) (pypy-3.9, v3.9, PyPy)
The job was canceled because "_3_11_v3_11_CPython" failed.
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Test (OSX) (pypy-3.8, v3.8, PyPy)
The job was canceled because "_3_11_v3_11_CPython" failed.
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Test (OSX) (3.8, v3.8, CPython)
The job was canceled because "_3_11_v3_11_CPython" failed.
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Test (OSX) (3.10, v3.10, CPython)
The operation was canceled.
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Test (Linux, arm64) (cp311-manylinux_aarch64)
Command ['sh', '-c', 'python -m unittest pyhmmer.tests -vv'] failed with code 1.
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Test (Linux, arm64) (cp311-manylinux_aarch64)
Process completed with exit code 1.
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Test (Linux, arm64) (cp310-manylinux_aarch64)
The operation was canceled.
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Test (Linux) (3.8, v3.8, CPython)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Test (Linux) (3.11, v3.11, CPython)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Test (Linux) (3.9, v3.9, CPython)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Test (Linux) (pypy-3.9, v3.9, PyPy)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Test (Linux) (pypy-3.8, v3.8, PyPy)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Test (Linux) (3.10, v3.10, CPython)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Test (Linux) (3.7, v3.7, CPython)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Test (Linux) (pypy-3.7, v3.7, PyPy)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Test (OSX) (3.11, v3.11, CPython)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Test (OSX) (3.10, v3.10, CPython)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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