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Feat filter bam file with custom flags (#217) Python package #1179: Commit 520e614 pushed by alsmith151
January 6, 2025 16:34 27s develop
develop
January 6, 2025 16:34 27s
Bugfixes and improvements (#219) Python package #1178: Commit f3f3ab1 pushed by alsmith151
January 6, 2025 16:34 24s master
master
January 6, 2025 16:34 24s
Feat filter bam file with custom flags (#217) Python package #1177: Commit 520e614 pushed by CChahrour
December 18, 2024 15:18 18m 20s feat-meth-calling
feat-meth-calling
December 18, 2024 15:18 18m 20s
Merge branch 'develop' into feat-seqnado-init Python package #1176: Commit a798a89 pushed by alsmith151
November 18, 2024 18:37 2m 6s feat-seqnado-init
feat-seqnado-init
November 18, 2024 18:37 2m 6s
Feat filter bam file with custom flags (#217) Python package #1175: Commit 520e614 pushed by CChahrour
November 18, 2024 18:03 16m 52s develop
develop
November 18, 2024 18:03 16m 52s
fix(design, geo submission): Corrects input pairing in design and als… Python package #1174: Commit 1f02c98 pushed by alsmith151
November 18, 2024 18:03 19m 4s develop
develop
November 18, 2024 18:03 19m 4s
Fix bug when plotting not specified (#214) Python package #1173: Commit 7bdd54b pushed by alsmith151
November 18, 2024 17:59 18m 45s develop
develop
November 18, 2024 17:59 18m 45s
Fix resources (#210) Python package #1172: Commit d12c371 pushed by alsmith151
November 18, 2024 17:59 16m 48s develop_old
develop_old
November 18, 2024 17:59 16m 48s
skip chip-rx in tests Python package #1171: Commit b7d7378 pushed by CChahrour
November 18, 2024 17:44 15m 24s feat-filter-bam-file-with-custom-flags
feat-filter-bam-file-with-custom-flags
November 18, 2024 17:44 15m 24s
fix(config): remove samFlagExclude option from bamcoverage parameters… Python package #1170: Commit eb9fc69 pushed by alsmith151
November 18, 2024 17:44 17m 40s fix-inputs-not-correctly-assigned
fix-inputs-not-correctly-assigned
November 18, 2024 17:44 17m 40s
fix(design): adjust indexing for paired end experiment paths in Desig… Python package #1169: Commit 8821c1a pushed by alsmith151
November 18, 2024 17:38 12m 17s fix-inputs-not-correctly-assigned
fix-inputs-not-correctly-assigned
November 18, 2024 17:38 12m 17s
remove chip-rx se fastq Python package #1168: Commit eeb2779 pushed by CChahrour
November 18, 2024 17:29 12m 8s feat-filter-bam-file-with-custom-flags
feat-filter-bam-file-with-custom-flags
November 18, 2024 17:29 12m 8s
fix(config): remove samFlagInclude option from bamcoverage parameters… Python package #1167: Commit c26070e pushed by alsmith151
November 18, 2024 17:24 15m 22s fix-inputs-not-correctly-assigned
fix-inputs-not-correctly-assigned
November 18, 2024 17:24 15m 22s
add samtool options to config Python package #1166: Commit efcf02b pushed by CChahrour
November 18, 2024 17:05 12s feat-filter-bam-file-with-custom-flags
feat-filter-bam-file-with-custom-flags
November 18, 2024 17:05 12s
removed unnecessary filtering Python package #1165: Commit c0680c6 pushed by CChahrour
November 18, 2024 17:03 2m 38s feat-filter-bam-file-with-custom-flags
feat-filter-bam-file-with-custom-flags
November 18, 2024 17:03 2m 38s
add params to post process filter Python package #1164: Commit 7047a88 pushed by CChahrour
November 18, 2024 16:52 13m 11s feat-filter-bam-file-with-custom-flags
feat-filter-bam-file-with-custom-flags
November 18, 2024 16:52 13m 11s
update to stash Python package #1163: Commit c976f9f pushed by CChahrour
November 18, 2024 16:12 2m 55s feat-add-wasp
feat-add-wasp
November 18, 2024 16:12 2m 55s
feat(filtering): add filter options and implement BAM filtering rule Python package #1162: Commit 9d6dbef pushed by alsmith151
November 18, 2024 16:06 3m 15s feat-filter-bam-file-with-custom-flags
feat-filter-bam-file-with-custom-flags
November 18, 2024 16:06 3m 15s
fix(design): improve paired-end detection logic in GEOFiles class Python package #1161: Commit ca501fd pushed by alsmith151
November 18, 2024 15:01 9m 22s fix-inputs-not-correctly-assigned
fix-inputs-not-correctly-assigned
November 18, 2024 15:01 9m 22s
feat(design): add IP field to FastqSetIP and update sample handling i… Python package #1160: Commit 7498186 pushed by alsmith151
November 18, 2024 13:36 2m 32s fix-inputs-not-correctly-assigned
fix-inputs-not-correctly-assigned
November 18, 2024 13:36 2m 32s
fix(design): update GEOFiles to support additional file extensions an… Python package #1159: Commit d29316d pushed by alsmith151
November 18, 2024 13:12 2m 29s fix-inputs-not-correctly-assigned
fix-inputs-not-correctly-assigned
November 18, 2024 13:12 2m 29s
feat(design): enhance generate_fastq_raw_names to support paired-end … Python package #1158: Commit 0d3088d pushed by alsmith151
November 18, 2024 13:07 2m 36s fix-inputs-not-correctly-assigned
fix-inputs-not-correctly-assigned
November 18, 2024 13:07 2m 36s
fix(geo_submission): ensure output_file_name is converted to string f… Python package #1157: Commit 2d53b73 pushed by alsmith151
November 15, 2024 16:16 2m 18s fix-inputs-not-correctly-assigned
fix-inputs-not-correctly-assigned
November 15, 2024 16:16 2m 18s
refactor(geo_submission): remove unnecessary conversion of output_fil… Python package #1156: Commit 96914af pushed by alsmith151
November 15, 2024 16:08 2m 42s fix-inputs-not-correctly-assigned
fix-inputs-not-correctly-assigned
November 15, 2024 16:08 2m 42s
fix(geo_submission): update processed_data_files handling to check fo… Python package #1155: Commit 8afff39 pushed by alsmith151
November 15, 2024 16:03 2m 30s fix-inputs-not-correctly-assigned
fix-inputs-not-correctly-assigned
November 15, 2024 16:03 2m 30s