update

WGLab · Jun 2, 2023 · ff456c2 · ff456c2
1 parent 4ddc624
commit ff456c2
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/liqa_src/liqa.py b/liqa_src/liqa.py
@@ -39,7 +39,7 @@ def main():
         else:
             print("Please specify reference file format: gtf/ucsc")
 
-        if task == "novel":
+    if task == "novel":
         validArgList = ["-task", "-ref", "-format", "-out"]
         addAbsPath = [0, 1, 0, 3]
         message = "liqa -task  -ref <reference_file> -bam <list of bam file> -out <output_file>"