Code

restore peptide index support#71

Code

Merged

jke000 merged 18 commits intoUWPR:masterUWPR/Comet:masterfrom jke000:masterjke000/Comet:masterCopy head branch name to clipboardJan 2, 2025

+1,739-366

Commits

Commits on Nov 14, 2024

• intermediate commit to add back peptide index support

  jke000

  committed
  dade669

Commits on Dec 11, 2024

• another intermediate update; peptide index creation dies with more than 1 thread

  jke000

  committed
  2801dea

• add CometPeptideIndex files

  jke000

  committed
  d11f9c5

Commits on Dec 12, 2024

• use proper mutex to protect g_pvDBIndex and fix capturing proper protein file position for peptide index search

  jke000

  committed
  09dbe8b

• update VS project with CometPeptideIndex.cpp and .h files

  jke000

  committed
  7f67b5b

• remove -fconcepts from Makefile in hopes that macOS runner builds

  jke000

  committed
  4630630

• Makefile change to see if macOS compile works; complaint about no template named 'function' in namespace 'std' even with <functional> included in Threadpool.h

  jke000

  committed
  607e370

• another test with functional

  jke000

  committed
  7960092

• yet another functional try

  jke000

  committed
  389e74b

• another test

  jke000

  committed
  339145c

Commits on Dec 13, 2024

• another test

  jke000

  committed
  ef37653

• another test

  jke000

  committed
  4667e86

• another test

  jke000

  committed
  2079273

Commits on Dec 18, 2024

• Add CreatePeptideIndex and CreateFragmentIndex to CometWrapper.

  jke000

  committed
  7472e24

Commits on Dec 23, 2024

• Get peptide index working for DoSingleSpectrumSearchMultiResults call thru CometWrapper.

  jke000

  committed
  a113c41

Commits on Dec 27, 2024

• address memory leak in GetPrevNextAA that showed up with peptide index RTS

  jke000

  committed
  2ee25f1

Commits on Dec 31, 2024

• Skip some peptide index parsing on subsequent calls to DoSingleSpectrumSearchMultiResults().

  jke000

  committed
  54f1ff1

• Update Makefile

  Show description for 074d38e
  jke000

  authored
  074d38e