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Added kinetics to the HTML output from RMG-Py #33

Merged
merged 5 commits into from
Jun 10, 2011
Merged

Added kinetics to the HTML output from RMG-Py #33

merged 5 commits into from
Jun 10, 2011

Commits on Jun 8, 2011

  1. HTML ouptput of RMG run contains reaction kinetics and comments. 

    The HTML page also has the ability to toggle display of these details.

The separation between formatting and function has been slightly blurred 
by this approach (putting a toHTML() method in the actual class definition)
but I think it offers the most flexibility, at least until we can think
of a "better" way.
    @rwest
    rwest committed Jun 8, 2011
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  2. Local copy of jquery.min.js in external, for offline viewing of resul… 

    …ts html.

The results file in HTML format requires jquery for some of the display toggling.
This commit allows you to view results without an internet connection.
    @rwest
    rwest committed Jun 8, 2011
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  3. Tweak stylesheet in HTML output of RMG. 

    In some cases I think this is an improvement; in others perhaps not.
Not very important anyway.
    @rwest
    rwest committed Jun 8, 2011
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  4. Makefile has list of .PHONY targets. 

    This means that if you have a file or folder with the same name as one of these,
the target is run even if the file/folder is up to date.
    @rwest
    rwest committed Jun 8, 2011
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  5. Cythonized the new toHTML() methods in kinetics. 

    I forgot these when I added the methods. Hope this is correct.
    @rwest
    rwest committed Jun 8, 2011
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