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1. VETA VETA Public

   VETA - A simple tool do evaluate variant predictors

   Python 8 3

2. DeepIntronic_Benchmark DeepIntronic_Benchmark Public

   Repo that contains the data and code to reproduce the evaluation of computational methods to predict deep intronic variation.

   HTML 1

3. dress dress Public

   A toolkit for studying RNA splicing using deep learning models.

   Python

4. Synthetic_datasets_generation Synthetic_datasets_generation Public

   Code to reproduce the results from the GECCO'24 paper on generating synthetic datasets in genomicsned in the benchmark of prediction tools to predict Hypertrophic Cardiomyopathy associated variants

   Jupyter Notebook 1

5. Prepare_SplicingPredictors Prepare_SplicingPredictors Public

   Set of scripts to prepare the input to run several splicing-related tools from VCF files

   Python 1

6. paper_HCM_benchmark paper_HCM_benchmark Public

   This repo contains the code to reproduce the results obtained in the benchmark of prediction tools to predict Hypertrophic Cardiomyopathy associated variants

   Jupyter Notebook 6 2