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add check flags to GNU CI and fix for data_override ci failures #1579

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add check flags to GNU CI and fix for data_override ci failures #1579

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a8c1a33
add in debug flags to gnu ci and attempt to fix data_override ci fail…
Aug 28, 2024
67dc4dd
add variable for flags
Aug 29, 2024
f27608f
Merge branch 'main' of github.com:noaa-gfdl/FMS into ci-fixes
Aug 29, 2024
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5 changes: 3 additions & 2 deletions .github/workflows/github_autotools_gnu.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -25,17 +25,18 @@ jobs:
TEST_VERBOSE: 1
DISTCHECK_CONFIGURE_FLAGS: "${{ matrix.conf-flag }} ${{ matrix.input-flag }} ${{ matrix.io-flag }}"
SKIP_TESTS: "test_horiz_interp2.[23-24]" # TODO (couldn't reproduce outside CI)
DEBUG_FLAGS: "-O0 -g -fbounds-check -ffpe-trap=invalid,zero,overflow" # debug compiler flags taken from the mkmf template
steps:
- name: Checkout code
uses: actions/checkout@v4
- name: Prepare GNU autoconf for build
run: autoreconf -if
- name: Configure the build
if: ${{ matrix.conf-flag != '--disable-setting-flags' }}
run: ./configure ${DISTCHECK_CONFIGURE_FLAGS} || cat config.log
run: ./configure ${DISTCHECK_CONFIGURE_FLAGS} FCFLAGS="$FCFLAGS $DEBUG_FLAGS"
- name: Configure the build with compiler flags
if: ${{ matrix.conf-flag == '--disable-setting-flags' }}
run: ./configure ${DISTCHECK_CONFIGURE_FLAGS} FCFLAGS="-fdefault-real-8 -fdefault-double-8 -fcray-pointer -ffree-line-length-none -I/usr/include $FCFLAGS" || cat config.log
run: ./configure ${DISTCHECK_CONFIGURE_FLAGS} FCFLAGS="-fdefault-real-8 -fdefault-double-8 -fcray-pointer -ffree-line-length-none -I/usr/include $FCFLAGS $DEBUG_FLAGS" || cat config.log
- name: Build the library
run: make distcheck
if: ${{ matrix.conf-flag != '--with-mpi=no' }}
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3 changes: 2 additions & 1 deletion test_fms/data_override/test_data_override2_mono.sh
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Expand Up @@ -40,10 +40,11 @@ _EOF

for KIND in r4 r8
do
rm -rf INPUT/*
test_expect_success "test_data_override with monotonically increasing and decreasing data sets (${KIND})" '
mpirun -n 6 ../test_data_override_ongrid_${KIND}
'
rm -f INPUT/*
sync
done

rm -rf data_table
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