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Update submodule06_putting_it_all_together.ipynb
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fix broken Spades link to match the one used in the GCP notebook
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RossCampbellNIH2 authored Oct 18, 2024
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"source": [
"## Assembling the Genome (Spades)\n",
"----------\n",
"The assembler we are using here, [`spades`](https://cab.spbu.ru/files/release3.15.4/manual.html) is a commonly used assembler for small genomes, think bacteria and viruses. For larger genomes we recommend using something like [`bowtie2`]() or [`bwa`](). \n",
"The assembler we are using here, [`spades`](https://bio.tools/spades) is a commonly used assembler for small genomes, think bacteria and viruses. For larger genomes we recommend using something like [`bowtie2`]() or [`bwa`](). \n",
"\n",
"<p align=\"center\">\n",
"<img src=\"images/assembly.jpg\" alt=\"assembly\" width=\"50%\"/>\n",
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