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Enh/docs html upload #4

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Commits on Sep 15, 2020

  1. bug fixed dealing with units

    @pbouss
    pbouss committed Sep 15, 2020
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  2. fixed same unit error in trial shuffling

    @pbouss
    pbouss committed Sep 15, 2020
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Commits on Sep 18, 2020

  1. added Bielefeld fim.so and adapted filtering and added window param t… 

    …o fpgrowth
    @stellalessandra
    stellalessandra committed Sep 18, 2020
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  2. removed max_occ test

    @stellalessandra
    stellalessandra committed Sep 18, 2020
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Commits on Sep 21, 2020

  1. Merge branch 'master' into enh/accelerated_spade

    @stellalessandra
    stellalessandra committed Sep 21, 2020
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  2. further unit stuff

    @pbouss
    pbouss committed Sep 21, 2020
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Commits on Sep 24, 2020

  1. Merge remote-tracking branch 'origin/fix/bin_shuffling' into enh/acce… 

    …lerated_spade
    @stellalessandra
    stellalessandra committed Sep 24, 2020
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Commits on Jan 25, 2021

  1. fixed conflict when merging with master

    Alessandra Stella committed Jan 25, 2021
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  2. Merge branch 'master' into enh/accelerated_spade

    Alessandra Stella committed Jan 25, 2021
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Commits on Jan 28, 2021

  1. Merge branch 'master' into enh/accelerated_spade

    Alessandra Stella committed Jan 28, 2021
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Commits on Feb 8, 2021

  1. fixed merge

    @stellalessandra
    stellalessandra committed Feb 8, 2021
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Commits on Feb 9, 2021

  1. debugging for new fim version

    @stellalessandra
    stellalessandra committed Feb 9, 2021
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Commits on Feb 17, 2021

  1. enabled multithreading in fpgrowth

    @stellalessandra
    stellalessandra committed Feb 17, 2021
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  2. less verbose in spade

    @stellalessandra
    stellalessandra committed Feb 17, 2021
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Commits on Mar 26, 2021

  1. added correction factor to rate estimation

    @pbouss
    pbouss committed Mar 26, 2021
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  2. only spiketrain with more than one spikes are corrected

    @pbouss
    pbouss committed Mar 26, 2021
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Commits on Apr 2, 2021

  1. Merge branch 'enh/accelerated_spade'

    @stellalessandra
    stellalessandra committed Apr 2, 2021
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Commits on Apr 12, 2021

  1. added test of boundary correction

    @pbouss
    pbouss committed Apr 12, 2021
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  2. Merge branch 'master' into feature/boundary_correction_rate

    @pbouss
    pbouss committed Apr 12, 2021
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  3. PEP8

    @pbouss
    pbouss committed Apr 12, 2021
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  4. revert wrongly merged master

    @pbouss
    pbouss committed Apr 12, 2021
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Commits on Apr 26, 2021

  1. renamed to border correction

    @pbouss
    pbouss committed Apr 26, 2021
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Commits on Aug 2, 2021

  1. removed paper citation

    @pbouss
    pbouss committed Aug 2, 2021
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Commits on Aug 4, 2021

  1. not-new release of scipy

    @pbouss
    pbouss committed Aug 4, 2021
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  2. not-new release of neo

    @pbouss
    pbouss committed Aug 4, 2021
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Commits on Aug 19, 2021

  1. worked in review, especially adding documentation

    @pbouss
    pbouss committed Aug 19, 2021
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Commits on Sep 20, 2021

  1. First fix for unittests missing fake_neo objects

    @mdenker
    mdenker committed Sep 20, 2021
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  2. Merge branch 'master' into feature/boundary_correction_rate

    @pbouss
    pbouss committed Sep 20, 2021
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Commits on Dec 13, 2021

  1. updated UE tutorial and requirements to use nixio 1.5.0 (INM-6#86)

    @Moritz-Alexander-Kern
    Moritz-Alexander-Kern authored Dec 13, 2021
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  2. updated links for datasets used in tutorials asset and UE

    Moritz-Alexander-Kern committed Dec 13, 2021
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  3. use 'read only' to assure backwards compatibility

    Moritz-Alexander-Kern committed Dec 13, 2021
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  4. reset outputs of notebook

    Moritz-Alexander-Kern committed Dec 13, 2021
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Commits on Jan 28, 2022

  1. Changed Typo 

    Co-authored-by: Moritz Kern <[email protected]>
    @pbouss @Moritz-Alexander-Kern
    pbouss and Moritz-Alexander-Kern authored Jan 28, 2022
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Commits on Feb 3, 2022

  1. Fixed all GetAllObjsTestCase unit tests

    @mdenker
    mdenker committed Feb 3, 2022
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  2. Started work on Events test case

    @mdenker
    mdenker committed Feb 3, 2022
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Commits on Feb 4, 2022

  1. Fixed Events test case

    @mdenker
    mdenker committed Feb 4, 2022
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  2. Fixed Epochs and Spiketrain tests

    @mdenker
    mdenker committed Feb 4, 2022
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  3. Starting to fix ExtractNeoAttrs

    @mdenker
    mdenker committed Feb 4, 2022
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  4. 7 more failing tests for ExtractNeoAttrs

    @mdenker
    mdenker committed Feb 4, 2022
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  5. All neo_tools tests fixed for Neo 0.10

    @mdenker
    mdenker committed Feb 4, 2022
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  6. Enabled dataset generators from neo 0.10.0

    @mdenker
    mdenker committed Feb 4, 2022
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Commits on Feb 7, 2022

  1. This PR adds SpikeTrainList as output of get_all_spiketrains()`

    @mdenker
    mdenker committed Feb 7, 2022
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  2. Use SpikeTrainList, work around SpikeTrainList.extend() bug.

    @mdenker
    mdenker committed Feb 7, 2022
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  3. Fix pandas_bridge tests to work without fake_neo()

    @mdenker
    mdenker committed Feb 7, 2022
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  4. PEP8 Line length corrections

    @mdenker
    mdenker committed Feb 7, 2022
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  5. More PEP8 finishes

    @mdenker
    mdenker committed Feb 7, 2022
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  6. Yet more PEP8 finishes

    @mdenker
    mdenker committed Feb 7, 2022
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  7. Last PEP8 finish

    @mdenker
    mdenker committed Feb 7, 2022
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  8. Handle SpikeTrainList as input for BinnedSpikeTrain

    @mdenker
    mdenker committed Feb 7, 2022
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  9. Add corresponding regression test

    @mdenker
    mdenker committed Feb 7, 2022
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  10. PEP 8; avoid universal try-except clause

    @mdenker
    mdenker committed Feb 7, 2022
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Commits on Feb 8, 2022

  1. Fixed SpikeTrainList issue in spike train synchrony class

    @mdenker
    mdenker committed Feb 8, 2022
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  2. Fixed SpikeTrainList issue in SPADE

    @mdenker
    mdenker committed Feb 8, 2022
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  3. Pep8 issue

    @mdenker
    mdenker committed Feb 8, 2022
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Commits on Feb 9, 2022

  1. Update elephant/neo_tools.py 

    Co-authored-by: Michael Denker <[email protected]>
    @Moritz-Alexander-Kern @mdenker
    Moritz-Alexander-Kern and mdenker authored Feb 9, 2022
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Commits on Feb 11, 2022

  1. added CI.yml containing workflows

    Moritz-Alexander-Kern committed Feb 11, 2022
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  2. added badge for CI tests to README.md

    Moritz-Alexander-Kern committed Feb 11, 2022
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  3. restructured requirements, environment.yml refactored to environment-… 

    …docs.yml and environment-tests.yml.
    Moritz-Alexander-Kern committed Feb 11, 2022
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  4. adapted runners according to new new .yml files

    Moritz-Alexander-Kern committed Feb 11, 2022
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  5. re-add environment.yml for Travis, to be removed together with travis… 

    ….yml
    Moritz-Alexander-Kern committed Feb 11, 2022
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Commits on Feb 14, 2022

  1. Merge branch 'master' into feature/boundary_correction_rate

    @pbouss
    pbouss committed Feb 14, 2022
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  2. instantaneous rate test -> more spiketrains to make it run

    @pbouss
    pbouss committed Feb 14, 2022
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Commits on Feb 15, 2022

  1. fixed deprecation warnings, replaced homogeneous_poisson_process with… 

    … StationaryPoissonProcess
    Moritz-Alexander-Kern committed Feb 15, 2022
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Commits on Feb 17, 2022

  1. added import for scipy.signal

    Moritz-Alexander-Kern committed Feb 17, 2022
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Commits on Feb 18, 2022

  1. fixed size of output for instantaneous_rate, edited unittests accordi… 

    …ngly
    Moritz-Alexander-Kern committed Feb 18, 2022
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  2. test to check length of outputs

    Moritz-Alexander-Kern committed Feb 18, 2022
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Commits on Mar 1, 2022

  1. added unittest to check consistency of rate times (should be multiple… 

    … of sampling period), to get consistent ouput sizes, cutting of wings is done by fft convolve for center_kernel=True
    Moritz-Alexander-Kern committed Mar 1, 2022
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  2. fixed pep8, added comments, restructure

    Moritz-Alexander-Kern committed Mar 1, 2022
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Commits on Mar 9, 2022

  1. added include endpoint option

    Moritz-Alexander-Kern committed Mar 9, 2022
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Commits on Mar 10, 2022

  1. This removes support of RrcordingChannelGroup in CSD methods.

    @mdenker
    mdenker committed Mar 10, 2022
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  2. Changed requirements to Neo >=0.10.0

    @mdenker
    mdenker committed Mar 10, 2022
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  3. Fix spiketrain lists in instantaneous rate.

    @mdenker
    mdenker committed Mar 10, 2022
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Commits on Mar 11, 2022

  1. added notes to docstrings, reformat docstrings and code, removed endp… 

    …oint option
    Moritz-Alexander-Kern committed Mar 11, 2022
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Commits on Mar 14, 2022

  1. update requirements in environment-*.yml to neo>=0.10.0

    Moritz-Alexander-Kern committed Mar 14, 2022
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  2. updated .yml files to python version 3.7

    Moritz-Alexander-Kern committed Mar 14, 2022
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  3. removed python 3.6 from docs 'install.rst', added python version requ… 

    …irement to `setup.py`
    Moritz-Alexander-Kern committed Mar 14, 2022
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  4. Merge branch 'master' into feature/github_actions_CI

    @Moritz-Alexander-Kern
    Moritz-Alexander-Kern authored Mar 14, 2022
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  5. rename travis conda 3.6 extras,opencl runner

    Moritz-Alexander-Kern committed Mar 14, 2022
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  6. Merge remote-tracking branch 'origin/feature/github_actions_CI' into … 

    …feature/github_actions_CI
    Moritz-Alexander-Kern committed Mar 14, 2022
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  7. updated build_wheels workflow to exclude python 3.6

    Moritz-Alexander-Kern committed Mar 14, 2022
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  8. removed redundant line

    Moritz-Alexander-Kern committed Mar 14, 2022
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  9. changed structure of installation for docs runner

    Moritz-Alexander-Kern committed Mar 14, 2022
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  10. added extras to docs runner

    Moritz-Alexander-Kern committed Mar 14, 2022
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  11. Merge remote-tracking branch 'origin/fix/spiketrainlist_test'

    Moritz-Alexander-Kern committed Mar 14, 2022
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  12. Merge remote-tracking branch 'origin/fix/fakeneo_missing'

    Moritz-Alexander-Kern committed Mar 14, 2022
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  13. Merge remote-tracking branch 'origin/feature/github_actions_CI'

    Moritz-Alexander-Kern committed Mar 14, 2022
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  14. Merge remote-tracking branch 'origin/fix/update_nixio_1.5.0'

    Moritz-Alexander-Kern committed Mar 14, 2022
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  15. Merge remote-tracking branch 'origin/feature/boundary_correction_rate'

    Moritz-Alexander-Kern committed Mar 14, 2022
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  16. Merge branch 'fix/instantaneous_rate_one_point_less' 

    # Conflicts:
#	elephant/statistics.py
#	elephant/test/test_statistics.py
    Moritz-Alexander-Kern committed Mar 14, 2022
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  17. merged changes for instantaneous rate

    Moritz-Alexander-Kern committed Mar 14, 2022
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  18. changed trigger for github actions CI

    Moritz-Alexander-Kern committed Mar 14, 2022
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Commits on Mar 23, 2022

  1. upload docs build html as artifact

    Moritz-Alexander-Kern committed Mar 23, 2022
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  2. conda runner, use newest pytest version

    Moritz-Alexander-Kern committed Mar 23, 2022
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Commits on Jul 6, 2022

  1. merged master into docs_html_upload

    Moritz-Alexander-Kern committed Jul 6, 2022
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  2. fixed .yml

    Moritz-Alexander-Kern committed Jul 6, 2022
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  3. fixed indentation

    Moritz-Alexander-Kern committed Jul 6, 2022
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Commits on Jul 26, 2022

  1. Update CI.yml

    @Moritz-Alexander-Kern
    Moritz-Alexander-Kern authored Jul 26, 2022
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