TwoSampleMR v0.6.11

• The tests using mr.raps are now run conditionally.
• The rsnps package has been removed from Suggests because the configuration of mr.raps has been corrected.

TwoSampleMR 0.6.10

• The mr.raps package was archived from CRAN on 2025-03-01.
  A later version (0.4.1) than was on CRAN (0.2) is available from its GitHub repo https://github.com/qingyuanzhao/mr.raps.
  We believe this later version still works as expected in TwoSampleMR.
  However, version 0.4.1 depends upon rsnps package which is itself now only available on its GitHub repo.
  Hence, we have added both packages to our https://mrcieu.r-universe.dev/ and added that to the Additional_repositories field in the DESCRIPTION.
  We have also moved mr.raps to the soft dependency list (Suggests list) and added rsnps to our Suggests list, both with remotes.
• Fix to default_parameters() helpfile

TwoSampleMR 0.6.9

• Fixed a bug in format_data() when the log_pval argument was set to TRUE (thanks to @luddeluddis)
• Amend references to MR-Base to OpenGWAS

TwoSampleMR 0.6.8

• Replaced some unique() calls in power_prune() with mean() to ensure scalar iv.se values (thanks @phageghost)
• Slightly improved formatting of code base

TwoSampleMR 0.6.7

• Update OpenGWAS API URLs
• Minor tweak to R CMD check GitHub Actions due to the rjson hard dependency of the MendelianRandomization package now requiring R >= 4.4.0
• Add dark mode to pkgdown site

TwoSampleMR 0.6.6

• Improve a test
• Improve permissions in GitHub Actions workflows
• Bump minimum required version of ieugwasr to 1.0.1
• Made some amends to the code to bring it more in line with lintr recommendations
• Added omitted tidyr soft dependency

TwoSampleMR 0.6.5

• Bumped version of roxygen2 for creating package documentation
• Update the earliest version of R in the R CMD check GitHub Actions workflow to be 4.3.2. This is because the meta dependency depends on lme4, and the recent 1.1-35.4 release of lme4 requires Matrix 1.6-2 which was released a few days after R 4.3.2.
• Made package tests more robust to non-response from the OpenGWAS API

TwoSampleMR 0.6.4

• Update installation instructions in README.md

• Fixed a bug in which the wrong indels recoding function was called (thanks @ruochiz)

TwoSampleMR 0.6.3

• Update startup messages

TwoSampleMR 0.6.2

• format_data() now errors if it detects its dat object is of class 'data.table' and issues a message informing the user to make their dat object simply a 'data.frame' (thanks to Si Fang @sifang1678)