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Dev/upload omim inheritance #5

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junyk wants to merge 4 commits into LOVDnl:master from junyk:dev/upload_omim_inheritance

junyk commented Feb 6, 2017

Source OMIM data from OMIM's genemap2.txt file where it has inheritance data.
Store inheritance data in a separate column in diseases table in LOVD.
Store inheritance data in abbreviated forms.
The list that maps inheritance models full name to its abbreviated forms is sourced from all unique inheritance models in genemap2.txt file. We then, go to OMIM website to find the abbreviated form of each of the inheritance models.

Juny Kesumadewi and others added 4 commits

January 23, 2017 18:08


          - Load diseases data from OMIM source that has inheritance model.

a9b48cc

- Include inheritance model in the disease name.


          Remove the step that remove the (number) from disease name as this wi…

c926a43

…ll be included in the pattern matching later on.


          Store OMIM inheritance models in the database in abbreviated forms.

614b90e


          Revert back user configuration to default settings and only change th…

fd3189e

…e omim data source file name.

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