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@LOVDnl

Leiden Open Variation Database

LOVD, the Leiden Open Variation Database, is a flexible, freely available tool for gene-centered collection and display of DNA variations.

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  1. LOVD3 LOVD3 Public

    LOVD3 development repository

    PHP 26 4

  2. LOVDplus LOVDplus Public

    LOVD+ -- LOVD for diagnostics: analysis of whole-exome data using LOVD.

    PHP 5 1

  3. geneloader geneloader Public

    Load genes, transcripts, and optionally diseases directly into LOVD3, using reliable external sources (HGNC and OMIM).

    PHP 2 2

  4. LOVD3_course LOVD3_course Public

    Scripts to build the LOVD3 course databases

    PHP 2

  5. external_view external_view Public

    External LOVD data viewer; allows any PHP website to show live data from a remote LOVD3 instance.

    PHP 1 1

  6. api.lovd.nl api.lovd.nl Public

    Generic LOVD APIs, available at api.LOVD.nl.

    PHP 1 1

Repositories

Showing 10 of 14 repositories
  • LOVD3 Public

    LOVD3 development repository

    LOVDnl/LOVD3’s past year of commit activity
    PHP 26 GPL-3.0 4 83 7 Updated Jan 16, 2025
  • HGVS-syntax-checker Public

    The LOVD HGVS syntax checker: a PHP library to validate variant descriptions in the HGVS nomenclature syntax. Aims to cover all possible valid syntax on DNA, RNA, and protein level, as well as many invalid descriptions, based on user input. Note that this library does not perform sequence-level validation. For this, use VariantValidator.org.

    LOVDnl/HGVS-syntax-checker’s past year of commit activity
    PHP 0 GPL-3.0 0 0 0 Updated Jan 14, 2025
  • caches Public

    Repository storing caches in use by several projects, like the VKGL import script.

    LOVDnl/caches’s past year of commit activity
    Shell 0 GPL-3.0 0 0 0 Updated Oct 11, 2024
  • VKGL_import Public

    Scripts that will take export files of DNA variant data from the Dutch genome diagnostic laboratories (VKGL), group the data, normalize the data, and import it into an LOVD3 or LOVD+ instance, possibly updating previous records.

    LOVDnl/VKGL_import’s past year of commit activity
    PHP 0 GPL-3.0 0 0 0 Updated Oct 4, 2024
  • fdp.lovd.nl Public

    Source code for the FDP.lovd.nl FAIR Data Point.

    LOVDnl/fdp.lovd.nl’s past year of commit activity
    PHP 0 GPL-3.0 0 0 0 Updated Sep 23, 2024
  • LOVDplus Public

    LOVD+ -- LOVD for diagnostics: analysis of whole-exome data using LOVD.

    LOVDnl/LOVDplus’s past year of commit activity
    PHP 5 GPL-3.0 1 2 1 Updated Jun 4, 2024
  • api.lovd.nl Public

    Generic LOVD APIs, available at api.LOVD.nl.

    LOVDnl/api.lovd.nl’s past year of commit activity
    PHP 1 GPL-3.0 1 0 0 Updated May 31, 2024
  • EJP-RD-LOVD-model Public

    Source code for the EJP-RD-LOVD semantic model.

    LOVDnl/EJP-RD-LOVD-model’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated Oct 12, 2023
  • external_view Public

    External LOVD data viewer; allows any PHP website to show live data from a remote LOVD3 instance.

    LOVDnl/external_view’s past year of commit activity
    PHP 1 GPL-3.0 1 0 0 Updated Feb 27, 2023
  • VarNomen Public Forked from HGVSnomenclature/VarNomen
    LOVDnl/VarNomen’s past year of commit activity
    HTML 0 5 0 0 Updated Feb 24, 2023
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