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Pr from fork/137 #254

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wants to merge 220 commits into from
Closed

Pr from fork/137 #254

wants to merge 220 commits into from

Commits on Mar 12, 2021

  1. Initial link against spack built caliper; ATOMIC_PI:BASE_OpenMP instr… 

    …umented; needs CALI_CONFIG env variable for output
    @jonesholger
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  2. suppress dirty blt

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Commits on Mar 19, 2021

  1. Caliper timer start/stop moved into kernel base so it covers all of t… 

    …he kernels
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Commits on Mar 29, 2021

  1. exclude warmup; add adiak and other configuration meta-data support

    @jonesholger
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  2. .gitignore update for vim swap files

    @jonesholger
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Commits on Mar 30, 2021

  1. change rajaperf_config so it's compatible with Caliper; Adiak::value … 

    …now works
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Commits on May 17, 2021

  1. per kernel.variant json files with additional adiak keys kernel, vari… 

    …ant, kernelvariant
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Commits on May 19, 2021

  1. change output to spot cali files, and generic kernel name for region

    @jonesholger
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Commits on Jun 9, 2021

  1. Initial Caliper manager per variant

    @jonesholger
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  2. Caliper tree is now variant->group->kernel

    @jonesholger
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Commits on Jun 15, 2021

  1. compiler_suffic adiak key; cleanup

    @jonesholger
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Commits on Jul 4, 2021

  1. Add perf.py Hatchet Notebook with GenericFrame class; allows comparis… 

    …on across variants
    @jonesholger
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  2. add some notes on how to pickup python caliperreader; remove default_… 

    …metric to work with older Hatchet
    @jonesholger
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Commits on Jul 7, 2021

  1. Merge branch 'develop' into use_caliper

    @jonesholger
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Commits on Jul 10, 2021

  1. add compiler version via cmake and compiler path version via regex of… 

    … exiting full path to executable
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Commits on Jul 14, 2021

  1. changed example perf notebook to use new compiler key and rename note… 

    …book with ipynb file type
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Commits on Aug 9, 2021

  1. Add ExtractCommonSubtree to perf.py to support comparing trees which … 

    …vary in number of kernels
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Commits on Sep 27, 2021

  1. use hatchet caliper native reader

    @jonesholger
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  2. Merge branch 'develop' into use_caliper

    @jonesholger
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  3. fix warmup logic; add adiak ProblemSize and SizeMeaning keys

    @jonesholger
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Commits on Oct 4, 2021

  1. perf.py supports running sweeps

    @jonesholger
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  2. Merge branch 'develop' into use_caliper

    @jonesholger
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Commits on Oct 5, 2021

  1. Merge branch 'bugfix/burmark1/HEAT_3D_index_mapping' into use_caliper

    @jonesholger
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Commits on Nov 3, 2021

  1. import of adiak works for adiak and adiak::adiak library exports; cle… 

    …anup of caliper includes
    @jonesholger
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  2. Merge branch 'develop' into use_caliper

    @jonesholger
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  3. remove hatchet based scripts until next hatchet/spot release; this wi… 

    …ll bring in Caliper native reader and adiak, removing our reliance on caliper.py
    @jonesholger
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Commits on Nov 30, 2021

  1. Merge branch 'develop' into use_caliper

    @jonesholger
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Commits on May 9, 2022

  1. Make sweep_size script more flexible 

    It can now take strings with spaces as executables.
This allows you to treat things like "srun -n8 ./bin/raja_perf.exe"
as an executable.
    @MrBurmark
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  2. Add graphing script to go with sweep script.

    @MrBurmark
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  3. Add more help in toss4 cray mvapich amdclang script

    @MrBurmark
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  4. Merge remote-tracking branch 'origin/develop' into feature/burmark1/g… 

    …raph_sweeps
    @MrBurmark
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  5. Add names to sweep_size script 

    This helps with graphing as they are used in naming graphs
    @MrBurmark
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  6. Remove extra text in graph names

    @MrBurmark
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Commits on May 10, 2022

  1. Change color factors to avoid saturating base

    @MrBurmark
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  2. Fix typos in sweep_size

    @MrBurmark
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  3. Add simple throughput to graph script

    @MrBurmark
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  4. Add more formatting to graphs 

    This helps differentiate different tunings and sweeps
    @MrBurmark
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  5. Add args to include or exclude kernels from graphing

    @MrBurmark
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  6. Avoid recounting run sizes

    @MrBurmark
    MrBurmark committed May 10, 2022
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  7. fixup graph naming

    @MrBurmark
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  8. Add options to include/exclude variants and tunings

    @MrBurmark
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Commits on May 11, 2022

  1. Fix issue with repeated run sizes

    @MrBurmark
    MrBurmark committed May 11, 2022
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  2. Add print of sweeps

    @MrBurmark
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Commits on May 20, 2022

  1. Refactor sweep_graph to use some classes

    @MrBurmark
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  2. Add templated data computation 

    This allows you to make new kinds of data from other kinds
without having to write every kind out beforehand, like
avg<time(s)> and avg<FLOPS>.
    @MrBurmark
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Commits on May 23, 2022

  1. plot on same graph, add linear regression 

    Now plotting multiple kinds of data will appear on the same graph
Added support for linear regression and segmented linear regression
    @MrBurmark
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Commits on May 24, 2022

  1. Add ability to graph bar charts across kernels

    @MrBurmark
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  2. Clarify segmented linear regression breakpoints

    @MrBurmark
    MrBurmark committed May 24, 2022
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  3. Add option to exclude sweeps

    @MrBurmark
    MrBurmark committed May 24, 2022
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  4. Add kernel groups to simplify plotting

    @MrBurmark
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Commits on May 25, 2022

  1. Add more generic data tree class

    @MrBurmark
    MrBurmark committed May 25, 2022
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  2. remove use test tuning

    @MrBurmark
    MrBurmark committed May 25, 2022
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  3. rename some variables

    @MrBurmark
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  4. Switched to more flexible copmute scheme 

    Now you can reduce over arbitrary axes
for example min<time(s)>[tuning_index]
will yield the min time across all tunings.
    @MrBurmark
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  5. Generalize graphing implementation 

    Only finished bar graphs so far
    @MrBurmark
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Commits on May 26, 2022

  1. Fix division by 0 error 

    Add tiny amount
    @MrBurmark
    MrBurmark committed May 26, 2022
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  2. fix split line plotting

    @MrBurmark
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Commits on Jun 1, 2022

  1. Add more color utilities

    @MrBurmark
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  2. fixup arg handling

    @MrBurmark
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  3. Add ability to change graph labels

    @MrBurmark
    MrBurmark committed Jun 1, 2022
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  4. Add and update kind templates

    @MrBurmark
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  5. Add histogram plotting

    @MrBurmark
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  6. Add option to move legend

    @MrBurmark
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  7. Move bar zorder to under axes

    @MrBurmark
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Commits on Jul 11, 2022

  1. Merge branch 'develop' into pr-from-fork/137 

    Resolve merge conflicts
    @rhornung67
    rhornung67 committed Jul 11, 2022
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  2. Code formatting

    @rhornung67
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  3. Fix merge errors

    @rhornung67
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Commits on Jul 13, 2022

  1. Merge branch 'develop' into pr-from-fork/137

    @rhornung67
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Commits on Jul 18, 2022

  1. Update CMakeLists.txt 

    Fix indentation formating

Co-authored-by: Jason Burmark <[email protected]>
    @rhornung67 @MrBurmark
    rhornung67 and MrBurmark authored Jul 18, 2022
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  2. Update src/basic/PI_ATOMIC-OMP.cpp 

    fix white space

Co-authored-by: Jason Burmark <[email protected]>
    @rhornung67 @MrBurmark
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  3. Update src/basic/PI_ATOMIC-OMP.cpp 

    fix whitespace

Co-authored-by: Jason Burmark <[email protected]>
    @rhornung67 @MrBurmark
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  4. Update .gitmodules 

    fix whitespace

Co-authored-by: Jason Burmark <[email protected]>
    @rhornung67 @MrBurmark
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  5. Update src/basic/PI_ATOMIC-OMP.cpp 

    fix whitespace

Co-authored-by: Jason Burmark <[email protected]>
    @rhornung67 @MrBurmark
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Commits on Jul 25, 2022

  1. Merge branch 'develop' into use_caliper 

    Add annotation layer for Kernel Tuning
Modified Cmake/Definition to RAJA_PERFSUITE_USE_CALIPER
Uncomment section in rajaperf_config.hpp.in and added config info for
HIP. Modified Adiak keys to match
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  2. Merge branch 'use_caliper' of https://github.com/jonesholger/RAJAPerf … 

    …into use_caliper
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Commits on Jul 26, 2022

  1. add +caliper spec to package.py; add include_directories for adiak

    @jonesholger
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Commits on Jul 27, 2022

  1. change set_target_properties for adiak target to for +cuda spec; we d… 

    …o this to be independent of adiak vs adiak::adiak target depending on spack version; eventually target should be set to adiak::adiak for versions of adiak 0.2.2+ introduced in newer versions of spack
    @jonesholger
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  2. Merge branch 'use_caliper' into pr-from-fork/137

    @jonesholger
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Commits on Aug 1, 2022

  1. gen per kernel adiak keyval such as runreps, itersperrep, etc

    @jonesholger
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  2. add adiak_ prefix to rajaperf::configuration variables in caliper sec… 

    …tion
    @jonesholger
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  3. remove compiler info noise

    @jonesholger
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  4. update spack package to use [email protected]; also add +rocm to caliper … 

    …spec when raja_perf +rocm
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Commits on Aug 2, 2022

  1. fixup cmake define to pickup caliper/adiak includes in src/CMakeLists… 

    ….txt; remove redundant includes in top level cmake
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  2. Merge branch 'pr-from-fork/137' into feature/holger/graph_sweeps_caliper

    @jonesholger
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Commits on Aug 3, 2022

  1. support output directory -od flag for spot output files

    @jonesholger
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  2. Merge branch 'pr-from-fork/137' into feature/holger/graph_sweeps_caliper

    @jonesholger
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Commits on Aug 10, 2022

  1. add support to process caliper timing info; still uses orig runinfo m… 

    …etadata
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Commits on Aug 16, 2022

  1. per kernel column metadata; currently exported as strings since some … 

    …of the fields can have very large values
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Commits on Aug 17, 2022

  1. Merge branch 'feature/burmark1/graph_sweeps' into caliper_metadata_at… 

    …tribute
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Commits on Aug 18, 2022

  1. fixup xdata sort order using numpy

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Commits on Aug 22, 2022

  1. switch kernel attribute metadata datatype to double

    @jonesholger
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  2. Merge branch 'caliper_metadata_attribute' into feature/holger/graph_s… 

    …weeps_caliper
    @jonesholger
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Commits on Sep 11, 2022

  1. modify adiak runinfo metadata so it can be used in python scripts as … 

    …a dict; edit sweep_graph.py to use eval to bring in runinfo meatadata
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Commits on Sep 13, 2022

  1. add checks for include/exclude kernels and error out in case of cmdli… 

    …ne typo
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  2. fix bug in read_caliper_runinfo_size removing errant continue in run_… 

    …size_index test
    @jonesholger
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Commits on Sep 20, 2022

  1. add legend order routine - currently developer centric as order is fi… 

    …xed but easily modified
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Commits on Sep 21, 2022

  1. fix doOnceCaliMeta for multiple tunings

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Commits on Sep 25, 2022

  1. parent/child parsers; add --directories; add prescan dict to parser n… 

    …amespace
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Commits on Oct 2, 2022

  1. continue integration of argparse_sweep_graph module

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  2. Merge branch 'develop' into pr-from-fork/137

    @jonesholger
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  3. adiak runinfo metadata is wrapped in dict so we can use eval in pytho… 

    …n scripts; fix column metadata entries so it is applied to all tunings
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Commits on Oct 4, 2022

  1. split off data classes into separate module data_classes_sweep_graph;… 

    … fix bug in caliper processing when we purposefully ignore specific variants or tunings
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Commits on Oct 5, 2022

  1. change column attribute data such as ProblemSize so aggregation is mo… 

    …re normal, i.e. doesn't include repeat |- artifacts
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Commits on Oct 7, 2022

  1. cmake Caliper/Adiak includes back in main so it's in one section, and… 

    … easily propagates to test directory
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  2. put cmake Caliper/Adiak includes back into top; accomodate [email protected].… 

    …2 wrt -pthread under cuda
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  3. Merge branch 'use_argparse' of github.com:jonesholger/RAJAPerf into u… 

    …se_argparse
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Commits on Oct 8, 2022

  1. Merge branch 'use_argparse' into pr-from-fork/137

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Commits on Oct 10, 2022

  1. Empty commit to force CI

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  2. Remove README banner that we don't want in develop

    @rhornung67
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  3. add caliper based prescan

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Commits on Oct 11, 2022

  1. Merge branch 'develop' into use_caliper

    @rhornung67
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  2. fix some namespace bugs wrt Data class; add kinds closeness check in … 

    …an argparse action for several arguments
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Commits on Oct 17, 2022

  1. move several free functions back into Data class - reorg not apropo y… 

    …et; kind action check now strips whitespace before closeness match; for test if we're using caliper use hasattr vs getattr
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  2. still need our local cr (caliper reader) object to pass to prescan

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  3. Merge branch 'use_argparse' into pr-from-fork/137

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  4. Merge branch 'pr-from-fork/137' of github.com:LLNL/RAJAPerf into pr-f… 

    …rom-fork/137
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Commits on Oct 18, 2022

  1. add --recolor --reformat flags; kind closeness check is more insensit… 

    …ive to case
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Commits on Oct 19, 2022

  1. Caliper column metadata Aggregatable attributes need to be initialize… 

    …d before Manager start - now these are init'ed in KernelBase ctor
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  2. Merge branch 'use_argparse' into pr-from-fork/137

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Commits on Oct 21, 2022

  1. add --recolor --reformat flags; kind closeness check is more insensit… 

    …ive to case
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  2. Caliper column metadata Aggregatable attributes need to be initialize… 

    …d before Manager start - now these are init'ed in KernelBase ctor
    @jonesholger
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  3. Spot config add via command line argument implemented, e.g. you can s… 

    …pecify on the command line -atsc topdown.all
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  4. add help text for --add-to-spot-config -atsc

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Commits on Oct 22, 2022

  1. Merge branch 'caliper-value-add' into pr-from-fork/137

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Commits on Oct 23, 2022

  1. advance caliper to caliper@master until [email protected] is released

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Commits on Oct 26, 2022

  1. Merge branch 'pr-from-fork/137' into use_caliper

    @jonesholger
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Commits on Nov 7, 2022

  1. use cmp0048 for project version, and propagate to original version va… 

    …riables; sweep_graph now supports column metadata; new map entry for _OPENMP at 5.2
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Commits on Nov 8, 2022

  1. remove dirty git ignore for BLT in .gitmodules; add README.md documen… 

    …tation for Using Caliper in RAJAPerf
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  2. add Use Caliper to table of contents in README.md

    @jonesholger
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  3. adjust for github render

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Commits on Nov 9, 2022

  1. Add event-trace info for CUDA and ROCM; to be viewed in chrome or per… 

    …fetto
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  2. noticed an issue with rendering text between < > brackets on github

    @jonesholger
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Commits on Nov 14, 2022

  1. minor edits to README -- mostly format/highlight tags

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  2. Merge branch 'develop' into use_caliper

    @jonesholger
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Commits on Nov 15, 2022

  1. advance spack commit in uberenv config to v0.19.0 via hash

    @jonesholger
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Commits on Nov 17, 2022

  1. setup new adiak key ProblemSizeRunParam to reflect command line arg -… 

    …-size or --sizefact; cleanup some unused code
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  2. fix _OPENMP version detect, including out-of-range for map version en… 

    …tries with try/catch, map 201611 to 4.5 (Intel)
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Commits on Nov 29, 2022

  1. Merge branch 'develop' into pr-from-fork/137

    @rhornung67
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Commits on Dec 8, 2022

  1. More detail for the topdown/PAPI section of the documentation

    @jonesholger
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  2. Update README.md

    @jonesholger
    jonesholger authored Dec 8, 2022
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  3. Update README.md

    @jonesholger
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  4. Update README.md

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Commits on Dec 12, 2022

  1. Merge branch 'use_caliper' into pr-from-fork/137

    @jonesholger
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  2. update uberenv config file for Spack v0.19.0; add Caliper and Adiak p… 

    …refixes to Spack package.py
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Commits on Jan 5, 2023

  1. Merge branch 'develop' into pr-from-fork/137 

    and resolve merge conflicts
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Commits on Jan 9, 2023

  1. Update (and fix) flags syntax in CI

    @adrienbernede
    adrienbernede committed Jan 9, 2023
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  2. Update shared CI

    @adrienbernede
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  3. Attempt to build with caliper

    @adrienbernede
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  4. Update tpl/RAJA to get latest changes in RAJA CI

    @adrienbernede
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  5. Update extra specs in lassen CI

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Commits on Jan 10, 2023

  1. Specify cuda_arch when building with Cuda

    @adrienbernede
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  2. Fix caliper CI job name

    @adrienbernede
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  3. Merge pull request #280 from LLNL/woptim/caliper-integration 

    Fix CI for Caliper integration branch
    @adrienbernede
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Commits on Jan 12, 2023

  1. Add the option to not build and test in /dev/shm + copy caliper files… 

    … in dedicated directory
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  2. Do not use /dev/shm for caliper job

    @adrienbernede
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  3. Protect cali files copy with existence check

    @adrienbernede
    adrienbernede committed Jan 12, 2023
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  4. Add caliper reference files + minor

    @adrienbernede
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  5. Minor

    @adrienbernede
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  6. Add a comparison report between cali files using hatchet

    @adrienbernede
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  7. Fix script name and path

    @adrienbernede
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  8. TEMP: de-activate unneeded part of the CI

    @adrienbernede
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  9. Fix script call path

    @adrienbernede
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  10. Fix python script

    @adrienbernede
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  11. Add missing extension

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Commits on Jan 13, 2023

  1. Fix baseline dir

    @adrienbernede
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  2. Fix use existing field

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Commits on Jan 17, 2023

  1. Revert "TEMP: de-activate unneeded part of the CI" 

    This reverts commit e3fc7d7.
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Commits on Jan 20, 2023

  1. add support for cross-variant comparisons

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Commits on Jan 23, 2023

  1. replace optparse with argparse

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Commits on Feb 17, 2023

  1. Merge branch 'develop' into pr-from-fork/137

    @adrienbernede
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  2. Merge branch 'pr-from-fork/137' into woptim/caliper-integration

    @adrienbernede
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Commits on Feb 20, 2023

  1. Add usptream spack management to build_and_test script

    @adrienbernede
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  2. Fix typo

    @adrienbernede
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  3. Protect against unititialized upstream

    @adrienbernede
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  4. Fix typo

    @adrienbernede
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  5. Prevent setting upstream when updating it

    @adrienbernede
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  6. Fix typo

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Commits on Feb 21, 2023

  1. Fix boolean use

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Commits on Mar 8, 2023

  1. Merge branch 'develop' into pr-from-fork/137

    @adrienbernede
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  2. Merge branch 'pr-from-fork/137' into woptim/caliper-integration

    @adrienbernede
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  3. Merge pull request #298 from LLNL/hatchet-analysis-crossvariant 

    Hatchet analysis crossvariant
    @adrienbernede
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  4. Add some comments

    @adrienbernede
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  5. Deactivate a deprecated spec

    @adrienbernede
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  6. Remove reference files and move to in-commit perf comparison

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Commits on Mar 9, 2023

  1. Store filtered graphframes in copy

    @adrienbernede
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  2. Add caliper target to lassen and corona, add Cuda and OmpTarget analysis

    @adrienbernede
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  3. Merge branch 'woptim/share-raja-perf-package' into pr-from-fork/137

    @adrienbernede
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Commits on Mar 10, 2023

  1. Remove cuda-arch in non-cuda spec

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  2. Merge branch 'pr-from-fork/137' into woptim/caliper-integration

    @adrienbernede
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  3. Effectively use the upstream

    @adrienbernede
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  4. Fix upstream path

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Commits on Mar 13, 2023

  1. Remove superfluous comparison

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Commits on Mar 14, 2023

  1. Merge branch 'develop' into pr-from-fork/137

    @adrienbernede
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  2. Merge branch 'pr-from-fork/137' into woptim/caliper-integration

    @adrienbernede
    adrienbernede committed Mar 14, 2023
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  3. Actually use Base implementation as baseline

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Commits on Mar 17, 2023

  1. Use new CI queue in RAJAPerf

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    adrienbernede committed Mar 17, 2023
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  2. Update Rad Spack Conf (via RAJA) to Add python and elfutils as extern… 

    …al builds only
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    adrienbernede committed Mar 17, 2023
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  3. python 3.8.2 missing on toss4 machines, using 3.10.8

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    adrienbernede committed Mar 17, 2023
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  4. No system elfutils on toss4

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    adrienbernede committed Mar 17, 2023
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  5. No system elfutils on blueos

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    adrienbernede committed Mar 17, 2023
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  6. Point to RAJA@develop with new radiuss-spack-configs

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    adrienbernede committed Mar 17, 2023
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  7. Merge pull request #291 from LLNL/woptim/caliper-integration 

    Woptim/caliper integration
    @adrienbernede
    adrienbernede authored Mar 17, 2023
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Commits on Mar 18, 2023

  1. Merge branch 'develop' into pr-from-fork/137

    @jonesholger
    jonesholger committed Mar 18, 2023
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Commits on Mar 19, 2023

  1. added sphinx doc for building with caliper, and Caliper output

    @jonesholger
    jonesholger committed Mar 19, 2023
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  2. more generic MPI Init

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    jonesholger committed Mar 19, 2023
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Commits on Mar 20, 2023

  1. more sphinx docs for Caliper Use Cases; minor formatting

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    jonesholger committed Mar 20, 2023
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  2. sync tpl/RAJA

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Commits on Mar 22, 2023

  1. remove example script to build with Caliper; which also was outdated … 

    …since we need [email protected]; we can spack dev-build or uberenv against Caliper now
    @jonesholger
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Commits on Mar 31, 2023

  1. Merge branch 'develop' into pr-from-fork/137

    @rhornung67
    rhornung67 authored Mar 31, 2023
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Commits on Apr 7, 2023

  1. Merge branch 'develop' into pr-from-fork/137

    @adrienbernede
    adrienbernede authored Apr 7, 2023
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Commits on Apr 13, 2023

  1. clean-up, and add warning or note sphinx tags to caveats

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    jonesholger committed Apr 13, 2023
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  2. updating commit to add clean-up for RunParams.hpp

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    jonesholger committed Apr 13, 2023
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Commits on Apr 19, 2023

  1. fixup sweep_graph from merge

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    jonesholger committed Apr 19, 2023
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Commits on Apr 25, 2023

  1. Consistent formatting of macro usage and code

    @rhornung67
    rhornung67 committed Apr 25, 2023
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  2. Cleanup and formatting

    @rhornung67
    rhornung67 committed Apr 25, 2023
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  3. Merge branch 'develop' into pr-from-fork/137

    @rhornung67
    rhornung67 authored Apr 25, 2023
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Commits on May 1, 2023

  1. move sweep relate scripts into their own directory

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    jonesholger committed May 1, 2023
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Commits on May 3, 2023

  1. Merge branch 'pr-from-fork/137' of https://github.com/LLNL/RAJAPerf i… 

    …nto pr-from-fork/137
    @jonesholger
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Commits on May 10, 2023

  1. finesse docs wrt to several python script examples, either by removin… 

    …g from doc and referring to file with function, or note indicating dependency version
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    jonesholger committed May 10, 2023
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Commits on Jun 19, 2023

  1. Merge branch 'develop' into pr-from-fork/137

    @adrienbernede
    adrienbernede authored Jun 19, 2023
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