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Bernardo Niebuhr edited this page Feb 28, 2018 · 8 revisions

Patch ID maps

The output files with "pid" in file name are basically the patch or clumps identification. We will use the tool "Query results" in GRASS GIS to show the values attributed for the identification of a patch (pid). Note that the large green patch (The FEENA in Rio Claro) has pid equals to 9112.

Note that only habitat patches will present patch identification in the general pid files (sufix HABMAT_pid)

Query results are below:

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Brief description

Using LSMetrics

  1. Downloading LSMetrics

  2. Installing GRASS GIS

  3. Preparation of inputs

  4. Starting

    1. Open a GRASS GIS project
    2. Run LSMetrics

  5. Running LSMetrics through GUI

    1. Single or Multiple maps?
    2. Codes for habitat and Binary maps
    3. Structural connectivity
    4. Functional connectivity
    5. Edge, Habitat, and Core area
    6. Diversity
    7. pids and fids

  6. LSMetrics outputs

    1. Outputs of Structural connectivity
    2. Outputs of Functional connectivity
    3. Outputs of Edge, Habitat, and Core area
    4. Outputs of Diversity
    5. Outputs of pids and fids

  7. PDF manual

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