JULIE Lab
- 9 followers
- Jena, Germany
- https://julielab.de
- julielab@listserv.uni-jena.de
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Repositories
- gene-name-mapping Public
Code wrapped into a UIMA component that maps gene names found in scientific literature to NCBI Gene human gene IDs.
JULIELab/gene-name-mapping’s past year of commit activity - java-stdio-ipc Public
This is a small Java programm that uses the `ProcessBuilder` to call a Python programm on the command line and exchange data with it via standard input/output channels.
JULIELab/java-stdio-ipc’s past year of commit activity - jcore-pipeline-modules Public
Create JCoRe UIMA pipelines with a command line interface and run them using an auto-generated XML configuration file.
JULIELab/jcore-pipeline-modules’s past year of commit activity - gepi Public
GePI (GEne - Protein Interactions) is a web portal for quick and convenient access to gene - protein interaction mentions automatically extracted from the biomedical literature, i.e. PubMed and PubMed Central (Open Access Subset).
JULIELab/gepi’s past year of commit activity - smithsearch Public
A search engine for medical German text created in the context of the SMITH project.
JULIELab/smithsearch’s past year of commit activity - gnormplus Public
Code adaptions for the GNormPlus gene mapper (https://www.ncbi.nlm.nih.gov/research/bionlp/Tools/gnormplus/)
JULIELab/gnormplus’s past year of commit activity
