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@@ -5,6 +5,7 @@ | |
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[metadata] | ||
name = scimilarity | ||
version = 0.1.0 | ||
description = Single cell embedding into latent space and retrieving with kNN. | ||
author = Graham Heimberg, Tony Kuo, Nathaniel Diamant, Omar Salem, Héctor Corrada Bravo, Jason A. Vander Heiden | ||
author_email = [email protected] | ||
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@@ -23,7 +24,6 @@ platforms = any | |
# Add here all kinds of additional classifiers as defined under | ||
# https://pypi.org/classifiers/ | ||
classifiers = | ||
Development Status :: 3 - Alpha | ||
Intended Audience :: Science/Research | ||
License :: OSI Approved :: Apache Software License | ||
Natural Language :: English | ||
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@@ -47,24 +47,18 @@ python_requires = >=3.7 | |
# new major versions. This works if the required packages follow Semantic Versioning. | ||
# For more information, check out https://semver.org/. | ||
install_requires = | ||
importlib-metadata; python_version<"3.8" | ||
anndata>=0.8.0 | ||
captum>=0.5.0 | ||
circlify>=0.14.0 | ||
hnswlib>=0.8.0 | ||
matplotlib>=3.7.3 | ||
numpy>=1.24.4 | ||
obonet>=1.0.0 | ||
pandas>=1.5.3 | ||
pyarrow>=15.0.0 | ||
pytorch-lightning>=2.0.0 | ||
seaborn>=0.13.0 | ||
scanpy>=1.9.2 | ||
scipy>=1.7.3 | ||
tiledb>=0.18.2 | ||
torch>=1.10.1 | ||
tqdm | ||
zarr>=2.6.1 | ||
importlib-metadata; python_version<"3.8" | ||
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[options.packages.find] | ||
where = src | ||
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