Updated for MSigDB 7.2

GSEA-MSigDB · Sep 23, 2020 · 153b827 · 153b827
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commit 153b827
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diff --git a/docs/v10/index.html b/docs/v10/index.html
@@ -220,6 +220,11 @@ <h2>Version Comments</h2>
 					</tr>
 				</thead>
 				<tbody>
+                        <tr>
+                            <td>10.0.4</td>
+                            <td>2020-9-23</td>
+                            <td>Updated to MSigDB v7.2.</td>
+                        </tr>
                         <tr>
                             <td>10.0.3</td>
                             <td>2020-4-2</td>

diff --git a/docs/v10/test.md b/docs/v10/test.md
@@ -259,6 +259,11 @@ R-3.2
 </thead>
 <tbody>
 <tr class="odd">
+<td align="left">10.0.4</td>
+<td align="left">2020-9-23</td>
+<td align="left">Updated to MSigDB v7.2.</td>
+</tr>
+<tr class="odd">
 <td align="left">10.0.3</td>
 <td align="left">2020-4-2</td>
 <td align="left">Updated to MSigDB v7.1.</td>

diff --git a/manifest b/manifest
@@ -11,7 +11,7 @@ privacy=public
 userid=GenePattern
 quality=production
 taskType=Projection
-version=Updated to MSigDB v7.1.
+version=Updated to MSigDB v7.2.
 cpuType=any
 os=any
 LSID=urn\:lsid\:broad.mit.edu\:cancer.software.genepattern.module.analysis\:00270\:999999999
@@ -50,7 +50,7 @@ p3_optional=
 p3_prefix=
 p3_prefix_when_specified=
 p3_type=java.io.File
-p3_value=ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c1.all.v7.1.symbols.gmt\=c1.all.v7.1.symbols.gmt [Positional];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c2.all.v7.1.symbols.gmt\=c2.all.v7.1.symbols.gmt [Curated];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c2.cgp.v7.1.symbols.gmt\=c2.cgp.v7.1.symbols.gmt [Curated];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c2.cp.v7.1.symbols.gmt\=c2.cp.v7.1.symbols.gmt [Curated];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c2.cp.biocarta.v7.1.symbols.gmt\=c2.cp.biocarta.v7.1.symbols.gmt [Curated];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c2.cp.kegg.v7.1.symbols.gmt\=c2.cp.kegg.v7.1.symbols.gmt [Curated];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c2.cp.pid.v7.1.symbols.gmt\=c2.cp.pid.v7.1.symbols.gmt [Curated];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c2.cp.reactome.v7.1.symbols.gmt\=c2.cp.reactome.v7.1.symbols.gmt [Curated];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c3.all.v7.1.symbols.gmt\=c3.all.v7.1.symbols.gmt [Motif];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c3.mir.v7.1.symbols.gmt\=c3.mir.v7.1.symbols.gmt [Motif];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c3.tft.v7.1.symbols.gmt\=c3.tft.v7.1.symbols.gmt [Motif];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c4.all.v7.1.symbols.gmt\=c4.all.v7.1.symbols.gmt [Computational];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c4.cgn.v7.1.symbols.gmt\=c4.cgn.v7.1.symbols.gmt [Computational];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c4.cm.v7.1.symbols.gmt\=c4.cm.v7.1.symbols.gmt [Computational];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c5.all.v7.1.symbols.gmt\=c5.all.v7.1.symbols.gmt [Gene Ontology];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c5.bp.v7.1.symbols.gmt\=c5.bp.v7.1.symbols.gmt [Gene Ontology];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c5.cc.v7.1.symbols.gmt\=c5.cc.v7.1.symbols.gmt [Gene Ontology];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c5.mf.v7.1.symbols.gmt\=c5.mf.v7.1.symbols.gmt [Gene Ontology];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c6.all.v7.1.symbols.gmt\=c6.all.v7.1.symbols.gmt [Oncogenic Signatures];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c7.all.v7.1.symbols.gmt\=c7.all.v7.1.symbols.gmt [Immunologic signatures];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/h.all.v7.1.symbols.gmt\=h.all.v7.1.symbols.gmt [Hallmarks]
+p3_value=ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c1.all.v7.2.symbols.gmt\=c1.all.v7.2.symbols.gmt [Positional];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c2.all.v7.2.symbols.gmt\=c2.all.v7.2.symbols.gmt [Curated];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c2.cgp.v7.2.symbols.gmt\=c2.cgp.v7.2.symbols.gmt [Curated];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c2.cp.v7.2.symbols.gmt\=c2.cp.v7.2.symbols.gmt [Curated];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c2.cp.biocarta.v7.2.symbols.gmt\=c2.cp.biocarta.v7.2.symbols.gmt [Curated];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c2.cp.kegg.v7.2.symbols.gmt\=c2.cp.kegg.v7.2.symbols.gmt [Curated];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c2.cp.pid.v7.2.symbols.gmt\=c2.cp.pid.v7.2.symbols.gmt [Curated];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c2.cp.reactome.v7.2.symbols.gmt\=c2.cp.reactome.v7.2.symbols.gmt [Curated];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c2.cp.wikipathways.v7.2.symbols.gmt\=c2.cp.wikipathways.v7.2.symbols.gmt [Curated];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c3.all.v7.2.symbols.gmt\=c3.all.v7.2.symbols.gmt [Motif];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c3.mir.v7.2.symbols.gmt\=c3.mir.v7.2.symbols.gmt [Motif];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c3.mir.mirdb.v7.2.symbols.gmt\=c3.mir.mirdb.v7.2.symbols.gmt [Motif];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c3.mir.mir_legacy.v7.2.symbols.gmt\=c3.mir.mir_legacy.v7.2.symbols.gmt [Motif];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c3.tft.v7.2.symbols.gmt\=c3.tft.v7.2.symbols.gmt [Motif];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c3.tft.gtrd.v7.2.symbols.gmt\=c3.tft.gtrd.v7.2.symbols.gmt [Motif];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c3.tft.tft_legacy.v7.2.symbols.gmt\=c3.tft.tft_legacy.v7.2.symbols.gmt [Motif];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c4.all.v7.2.symbols.gmt\=c4.all.v7.2.symbols.gmt [Computational];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c4.cgn.v7.2.symbols.gmt\=c4.cgn.v7.2.symbols.gmt [Computational];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c4.cm.v7.2.symbols.gmt\=c4.cm.v7.2.symbols.gmt [Computational];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c5.all.v7.2.symbols.gmt\=c5.all.v7.2.symbols.gmt [Ontology];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c5.go.v7.2.symbols.gmt\=c5.go.v7.2.symbols.gmt [Gene Ontology];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c5.go.bp.v7.2.symbols.gmt\=c5.go.bp.v7.2.symbols.gmt [Gene Ontology];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c5.go.cc.v7.2.symbols.gmt\=c5.go.cc.v7.2.symbols.gmt [Gene Ontology];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c5.go.mf.v7.2.symbols.gmt\=c5.go.mf.v7.2.symbols.gmt [Gene Ontology];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c5.hpo.v7.2.symbols.gmt\=c5.hpo.v7.2.symbols.gmt [Human Phenotype Ontology];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c6.all.v7.2.symbols.gmt\=c6.all.v7.2.symbols.gmt [Oncogenic Signatures];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c7.all.v7.2.symbols.gmt\=c7.all.v7.2.symbols.gmt [Immunologic signatures];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/c8.all.v7.2.symbols.gmt\=c8.all.v7.2.symbols.gmt [cell type signatures];ftp\://gpftp.broadinstitute.org/module_support_files/msigdb/gmt/h.all.v7.2.symbols.gmt\=h.all.v7.2.symbols.gmt [Hallmarks]
 
 p4_default_value=Name
 p4_description=Specifies the gct data column containing gene symbols.  In most cases this will be "Column 1".

diff --git a/release.properties b/release.properties
@@ -1,5 +1,5 @@
-#Thu, 02 Apr 2020 08:55:20 +0900
+#Wed, 23 Sep 2020 13:06:54 +0900
 LSID.noVersion=urn\:lsid\:broad.mit.edu\:cancer.software.genepattern.module.analysis\:00270
 release.version=10.0
-build.number=3
-build.timestamp=Thu, 2 Apr 2020 08\:55\:20 +0900
+build.number=4
+build.timestamp=Wed, 23 Sep 2020 13\:06\:54 +0900